RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 TRBV23-1A0A0A0MS06 115 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 TMEM30CPA0ZSE6 113 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 TMEM235A6NFC5 223 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 NAPSAO96009 420 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 EDDM3BP56851 147 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 RPL31P62899 125 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 PAX2Q02962 417 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 MEF2CQ06413 473 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 EDDM3AQ14507 147 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 TPRX1Q8N7U7 411 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 MAPK1IP1LQ8NDC0 245 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 H1FXQ92522 213 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 CORO2AQ92828 525 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 DACT3Q96B18 629 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 DMRTB1Q96MA1 342 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 CMSS1Q9BQ75 279 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 RIMS4Q9H426 269 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 RABL2AQ9UBK7 228 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 KIF25Q9UIL4 384 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 RABL2BQ9UNT1 228 aa10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 MRPS7Q9Y2R9 242 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-201ENST00000359683 ABCA2Q9BZC7 2435 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 DSCAML1Q8TD84 2053 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 TRBV6-6A0A0A6YYG2 114 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 ODAMA1E959 279 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 B4DSR2 109 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 C22orf46C9J442 243 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 H7C1Q1 480 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 ETV6P41212 452 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 LCN2P80188 198 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 PITPNAQ00169 270 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 ARFRP1Q13795 201 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 CR1LQ2VPA4 569 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 TMEM249Q2WGJ8 235 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 TMEM200BQ69YZ2 307 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 ZNF880Q6PDB4 577 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 BAIAP2L2Q6UXY1 529 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 MRPL30Q8TCC3 161 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 C15orf40Q8WUR7 153 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 ABHD1Q96SE0 405 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 C19orf12Q9NSK7 152 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 LPAR3Q9UBY5 353 aa10.24□□□□□ -0.77
NIF3L1-201ENST00000359683 MEIKINA0A087WXM9 373 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 PPIAL4CA0A0B4J2A2 164 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 A0A0G2JMP0 313 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 A0A0X1KG70 313 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 hADV38S2A0JD32 116 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 FABP12A6NFH5 140 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 SSX5O60225 188 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 CD3GP09693 182 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 CGB3P0DN86 165 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 CGB7P0DN87 165 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 PTHLHP12272 177 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 FOSL1P15407 271 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 Q6ZPA2 131 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 TCF23Q7RTU1 214 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 LINC01356Q8N9X3 169 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 OR4M2Q8NGB6 313 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 OR4K15Q8NH41 348 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 HDHD3Q9BSH5 251 aaPredicted RBP10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 MBNL3Q9NUK0 354 aaKnown RBP10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 OR6C3Q9NZP0 311 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 KIAA2026Q5HYC2 2103 aa10.23□□□□□ -0.77
NIF3L1-201ENST00000359683 KIR2DS1A0A191URI9 304 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 LIPFP07098 398 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 MSMBP08118 114 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 PPIAL4GP0DN37 164 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 IGHV4-31P0DP07 118 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 GZMHP20718 246 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 PTBP1P26599 531 aaKnown RBP eCLIP10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 PRSS3P35030 304 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 GZMKP49863 264 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 GNG2P59768 71 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 MADCAM1Q13477 382 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 SNX29P2Q8IUI4 249 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 ZNF565Q8N9K5 539 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 OR13A1Q8NGR1 328 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 NUDCD2Q8WVJ2 157 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 MSI2Q96DH6 328 aaKnown RBP10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 COX4I2Q96KJ9 171 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 OCSTAMPQ9BR26 566 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 C12orf4Q9NQ89 552 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 MMP26Q9NRE1 261 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 TRAPPC2LQ9UL33 140 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 UBE2J1Q9Y385 318 aaPredicted RBP10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 V9GYH0 126 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 TRGV10A0A0A0MS01 117 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 TRAV39A0A0B4J263 110 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 IGHV2-70DA0A0C4DH43 119 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 SULT1C2O00338 296 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 CTDSPLO15194 276 aa10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 ENSAO43768 121 aaKnown RBP10.22□□□□□ -0.77
NIF3L1-201ENST00000359683 DTYMKP23919 212 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms