RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 OTUD1Q5VV17 481 aaPredicted RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 FAHD1Q6P587 224 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 ABHD17CQ6PCB6 329 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 PHYHIPLQ96FC7 376 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 CDX2Q99626 313 aaPredicted RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 IGHV3-49A0A0A0MS15 119 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 METTL12A8MUP2 240 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 SRSF10O75494 262 aaKnown RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 SFTA3P0C7M3 94 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 NOVP48745 357 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 LRRC75BQ2VPJ9 315 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 WDR88Q6ZMY6 472 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 SLCO4C1Q6ZQN7 724 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 A4GALTQ9NPC4 353 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 TMEM30AQ9NV96 361 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 IGHV3OR16-13A0A075B7E8 117 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 IGHV3-74A0A0B4J1X5 117 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 APCSP02743 223 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 TMEM33P57088 247 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 MIDNQ504T8 468 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 LINC01587Q99440 93 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 OR2W1Q9Y3N9 320 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 CD37P11049 281 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 DGCR2P98153 550 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 JOSD1Q15040 202 aaPredicted RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 HIKESHIQ53FT3 197 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 SLC25A33Q9BSK2 321 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 METTL1Q9UBP6 276 aaKnown RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 A0A1B0GTH9 108 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 CX3CL1P78423 397 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 CCL8P80075 99 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 ELOBQ15370 118 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 ACER2Q5QJU3 275 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 SLC23A3Q6PIS1 610 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 ZNF485Q8NCK3 441 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 GPA33Q99795 319 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 WNT5BQ9H1J7 359 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 GPR27Q9NS67 375 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 SETD1AO15047 1707 aaKnown RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 RPS4Y1P22090 263 aaKnown RBP8.63□□□□□ -1.03
CHD3-202ENST00000358181 C2orf83Q53S99 150 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 LDLRAD3Q86YD5 345 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 OR1L8Q8NGR8 309 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 C2orf50Q96LR7 162 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 PLA2G2FQ9BZM2 168 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 NUP205Q92621 2012 aa8.63□□□□□ -1.03
CHD3-202ENST00000358181 CCDC88CQ9P219 2028 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 C3orf85A0A1B0GTC6 90 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 C7orf71A4D174 169 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 HSPB2A8KAH6 182 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 SLC25A20O43772 301 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 ABLIM3O94929 683 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 HAND1O96004 215 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 FAM157CP0CG43 387 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 GABRA1P14867 456 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 OTX1P32242 354 aaPredicted RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 MRPL58Q14197 206 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 HSPB2Q16082 182 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 OR10D4PQ8NGN7 298 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 HGDQ93099 445 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 OPN3Q9H1Y3 402 aaPredicted RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 SPNS1Q9H2V7 528 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 RNF7Q9UBF6 113 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 TOGARAM1Q9Y4F4 1720 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 A0A1W2PS18 150 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 PLPP1O14494 284 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 CD3DP04234 171 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 NPPBP16860 134 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 PTBP1P26599 531 aaKnown RBP eCLIP8.62□□□□□ -1.034e-13■■■■□ 25.1
CHD3-202ENST00000358181 HLA-DRB5Q30154 266 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 RNF165Q6ZSG1 346 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 ADTRPQ96IZ2 230 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 SYT11Q9BT88 431 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 LRRC61Q9BV99 259 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 JAM3Q9BX67 310 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 TMEM38BQ9NVV0 291 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 EXOGQ9Y2C4 368 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 BGLAPP02818 100 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 PSMB6P28072 239 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 CAPZBP47756 277 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 DYNLT3P51808 116 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 CTF1Q16619 201 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 HCP5Q6MZN7 132 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 MAVSQ7Z434 540 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 Q8IYB0 196 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 ABHD14BQ96IU4 210 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 MTCH2Q9Y6C9 303 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 REG1AP05451 166 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 OR13F1Q8NGS4 319 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 OR4S2Q8NH73 311 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 OR4A5Q8NH83 315 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 DNASE2BQ8WZ79 361 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 ASB1Q9Y576 335 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 KIAA0100Q14667 2235 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 DDX60LQ5H9U9 1706 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms