RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GPR35Q9HC97 309 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 P4HTMQ9NXG6 502 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 RNF150Q9ULK6 438 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 LIPGQ9Y5X9 500 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 ATP23Q9Y6H3 246 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 TRAV20A0A0B4J274 112 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 SLC22A20A6NK97 555 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 KLF7O75840 302 aaPredicted RBP15.21■□□□□ 0.03
RTN4-204ENST00000357732 EDN3P14138 238 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 NTF4P34130 210 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 GLIPR1P48060 266 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 NPBWR2P48146 333 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 DLK1P80370 383 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 CXorf66Q5JRM2 361 aaPredicted RBP15.21■□□□□ 0.03
RTN4-204ENST00000357732 GAPTQ8N292 157 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 ZNF610Q8N9Z0 462 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 OR2Y1Q8NGV0 311 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 TMEM45BQ96B21 275 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 ADGRG7Q96K78 797 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 OPA3Q9H6K4 179 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 WNT16Q9UBV4 365 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 TINAGQ9UJW2 476 aa15.21■□□□□ 0.03
RTN4-204ENST00000357732 ARID1AO14497 2285 aa15.21■□□□□ 0.02
RTN4-204ENST00000357732 TNRC6BQ9UPQ9 1833 aaKnown RBP15.2■□□□□ 0.02
RTN4-204ENST00000357732 LRP5LA4QPB2 252 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 S100A2P29034 98 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 ASCL1P50553 236 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 H1FOOQ8IZA3 346 aaPredicted RBP15.2■□□□□ 0.02
RTN4-204ENST00000357732 LINC00469Q8N7U9 141 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 SUMF1Q8NBK3 374 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 OR2V1Q8NHB1 315 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 PLPPR1Q8TBJ4 325 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 PLK3Q9H4B4 646 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 RNF115Q9Y4L5 304 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 A0A1B0GU03 582 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 A0A1B0GV50 99 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 P04436 131 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 OMGP23515 440 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 ITGA3P26006 1051 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 CD81P60033 236 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 ACER2Q5QJU3 275 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 LYSMD4Q5XG99 296 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 ODF3L1Q8IXM7 274 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 RAB40CQ96S21 281 aa15.2■□□□□ 0.02
RTN4-204ENST00000357732 GAR1Q9NY12 217 aaKnown RBP15.2■□□□□ 0.02
RTN4-204ENST00000357732 ELOA3CA0A087WX78 387 aaPredicted RBP15.19■□□□□ 0.02
RTN4-204ENST00000357732 TRBV6-6A0A0A6YYG2 114 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 SEC14L6B5MCN3 397 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 IGHEP01854 428 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 TRA2AQ13595 282 aaKnown RBP eCLIP15.19■□□□□ 0.023e-8■■■□□ 18.5
RTN4-204ENST00000357732 MKXQ8IYA7 352 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 CYB561D1Q8N8Q1 229 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 ABHD14AQ9BUJ0 271 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 MED19A0JLT2 244 aaPredicted RBP15.19■□□□□ 0.02
RTN4-204ENST00000357732 CYTIPO60759 359 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 IFNA5P01569 189 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 RPL23AP62750 156 aaKnown RBP15.19■□□□□ 0.02
RTN4-204ENST00000357732 HAGHQ16775 308 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 NCMAPQ5T1S8 102 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 NAXEQ8NCW5 288 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 Q8WTZ3 238 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 EDARADDQ8WWZ3 215 aa15.19■□□□□ 0.02
RTN4-204ENST00000357732 REPIN1Q9BWE0 567 aaKnown RBP15.19■□□□□ 0.02
RTN4-204ENST00000357732 SHANK1Q9Y566 2161 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 LOC102723971A0A1B0GUV8 181 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 ZNF729A6NN14 1252 aaPredicted RBP15.18■□□□□ 0.02
RTN4-204ENST00000357732 CHST1O43916 411 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 PATE4P0C8F1 98 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 COX5BP10606 129 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 NOVA1P51513 510 aaKnown RBP15.18■□□□□ 0.02
RTN4-204ENST00000357732 PRSS12P56730 875 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 HLA-DRB3P79483 266 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 CLDN23Q96B33 292 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 TREM2Q9NZC2 230 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 YKT6O15498 198 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 CXCL13O43927 109 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 CST7O76096 145 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 TMEM50AO95807 157 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 HLA-BQ31612 363 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 CEACAM21Q3KPI0 293 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 LINC00470Q9BZP3 86 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 MAGT1Q9H0U3 335 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 DOK5Q9P104 306 aa15.18■□□□□ 0.02
RTN4-204ENST00000357732 H0YL77 283 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 SCTP09683 121 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 BCL3P20749 454 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 F2RP25116 425 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 PAX9P55771 341 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 HERPUD1Q15011 391 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 PDCD1Q15116 288 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 ZNF674Q2M3X9 581 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 OR10D3Q8NH80 312 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 FGFBP3Q8TAT2 258 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 P2RX4Q99571 388 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 PSMG3Q9BT73 122 aaPredicted RBP15.17■□□□□ 0.02
RTN4-204ENST00000357732 CISD1Q9NZ45 108 aaKnown RBP15.17■□□□□ 0.02
RTN4-204ENST00000357732 MMP24Q9Y5R2 645 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 CACNA1EQ15878 2313 aa15.17■□□□□ 0.02
RTN4-204ENST00000357732 PGLYRP1O75594 196 aaPredicted RBP15.17■□□□□ 0.02
RTN4-204ENST00000357732 ZDHHC23Q8IYP9 409 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms