RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 POLR2GP62487 172 aaKnown RBP eCLIP5.68□□□□□ -1.5
UPF2-201ENST00000356352 C19orf54Q5BKX5 351 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 AMMECR1LQ6DCA0 310 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CLEC18BQ6UXF7 455 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ZNF683Q8IZ20 524 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 SHISA5Q8N114 240 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 GAPTQ8N292 157 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 STPG3Q8N7X2 389 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 FADS6Q8N9I5 356 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PRR7Q8TB68 274 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ABHD14AQ9BUJ0 271 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CRISPLD2Q9H0B8 497 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 LPAR5Q9H1C0 372 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 DUSP15Q9H1R2 295 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 TNFRSF19Q9NS68 423 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 SF3B6Q9Y3B4 125 aaKnown RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 RREB1Q92766 1687 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PPIAL4EA0A075B759 164 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CTXND1A0A1B0GTU2 59 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 NPIPB6E9PJ23 425 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PPIAL4DF5H284 164 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 RHBDL1O75783 438 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PPIAL4FP0DN26 164 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 OR10J1P30954 320 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ERVS71-1P61550 626 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 LRRC75BQ2VPJ9 315 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 DMRTC1Q5HYR2 192 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 FBXW9Q5XUX1 488 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PTPMT1Q8WUK0 201 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 GHITMQ9H3K2 345 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 SLC25A10Q9UBX3 287 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 RABAC1Q9UI14 185 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 NEU3Q9UQ49 428 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PPIAL4AQ9Y536 164 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 OR51B2Q9Y5P1 312 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 WNT9BO14905 357 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CHST1O43916 411 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 SS18L1O75177 396 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 EML2O95834 649 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 HPRT1P00492 218 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 HBZP02008 142 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 MMP9P14780 707 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 GPR6P46095 362 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 SSX1Q16384 188 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 TEX30Q5JUR7 227 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 FAM24BQ8N5W8 94 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 OR5AU1Q8NGC0 362 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PTX4Q96A99 478 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CHST5Q9GZS9 411 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CHRNA10Q9GZZ6 450 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PCOLCE2Q9UKZ9 415 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ADAMTSL3P82987 1691 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 A0A1B0GTL3 188 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 B4E171 279 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 PITX3O75364 302 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 COX6B1P14854 86 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 LIFP15018 202 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MC5RP33032 325 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 ZNF658BQ4V348 819 aaPredicted RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 XAF1Q6GPH4 301 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 BPIFA4PQ86YQ2 179 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 TMEM251Q8N6I4 163 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 IL22RA2Q969J5 263 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MARS2Q96GW9 593 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 MOGAT1Q96PD6 335 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 RHNO1Q9BSD3 238 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MS4A7Q9GZW8 240 aaPredicted RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 SMDT1Q9H4I9 107 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 SRD5A3Q9H8P0 318 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MRPS16Q9Y3D3 137 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 LAMA4Q16363 1823 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 SCN7AQ01118 1682 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 M0R3E3 92 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 CDIPTO14735 213 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 RAB29O14966 203 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 ARG1P05089 322 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 CRHP06850 196 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 CT62P0C5K7 136 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 FAM157CP0CG43 387 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 FAM106CPP0CH98 169 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 B2MP61769 119 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 SPANXN1Q5VSR9 72 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 CLEC2AQ6UVW9 174 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 OR10J6PQ8NGY7 276 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MRPL30Q8TCC3 161 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 LINC00052Q96N35 136 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 P2RX4Q99571 388 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 PARP11Q9NR21 331 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 SLC6A13Q9NSD5 602 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 NHSQ6T4R5 1651 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 TRBV23-1A0A0A0MS06 115 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 BGLAPP02818 100 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 RD3LP0DJH9 198 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 METAP1P53582 386 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
UPF2-201ENST00000356352 EWSR1Q01844 656 aaKnown RBP eCLIP5.67□□□□□ -1.5
UPF2-201ENST00000356352 RRN3P1Q2M238 152 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 PRSS41Q7RTY9 318 aa5.67□□□□□ -1.5
UPF2-201ENST00000356352 MSRB3Q8IXL7 192 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms