RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RNASE11Q8TAA1 199 aaKnown RBP8.72□□□□□ -1.01
PTPRA-203ENST00000356147 GTF3AQ92664 365 aaKnown RBP8.72□□□□□ -1.01
PTPRA-203ENST00000356147 EXTL1Q92935 676 aa8.72□□□□□ -1.01
PTPRA-203ENST00000356147 SRXN1Q9BYN0 137 aa8.72□□□□□ -1.01
PTPRA-203ENST00000356147 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
PTPRA-203ENST00000356147 FSCN3Q9NQT6 498 aa8.72□□□□□ -1.01
PTPRA-203ENST00000356147 COL6A3P12111 3177 aa8.72□□□□□ -1.01
PTPRA-203ENST00000356147 A0A0J9YW62 118 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 CEBPZOSA8MTT3 80 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 GALR2O43603 387 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-203ENST00000356147 CA11O75493 328 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 ERVS71-1P61550 626 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 SLC25A53Q5H9E4 307 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF506Q5JVG8 444 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 RHBDD2Q6NTF9 364 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 YRDCQ86U90 279 aaKnown RBP8.71□□□□□ -1.01
PTPRA-203ENST00000356147 ZIC4Q8N9L1 334 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 SPSB1Q96BD6 273 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 SIGLEC12Q96PQ1 595 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 ATG101Q9BSB4 218 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 CABLES2Q9BTV7 478 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 SLC25A31Q9H0C2 315 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 CACNA1DQ01668 2161 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 SMCO3A2RU48 225 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 MSX1P28360 303 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 PAX9P55771 341 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 RTP5Q14D33 572 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 HERPUD1Q15011 391 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 CNN3Q15417 329 aaKnown RBP8.71□□□□□ -1.01
PTPRA-203ENST00000356147 ADIRFQ15847 76 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 FBXO46Q6PJ61 603 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-203ENST00000356147 MAML2Q8IZL2 1156 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-203ENST00000356147 ZNF488Q96MN9 340 aa8.71□□□□□ -1.01
PTPRA-203ENST00000356147 CHCHD2Q9Y6H1 151 aaPredicted RBP8.71□□□□□ -1.01
PTPRA-203ENST00000356147 IGHV3-64DA0A0J9YX35 117 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 PTBP3O95758 552 aaKnown RBP8.71□□□□□ -1.02
PTPRA-203ENST00000356147 HSPB1P04792 205 aaKnown RBP8.71□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF16P17020 682 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-203ENST00000356147 BCL3P20749 454 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 BMP5P22003 454 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 H3F3AP84243 136 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 CLN3Q13286 438 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 C1orf87Q8N0U7 546 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 OR1F12Q8NHA8 337 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 IL1F10Q8WWZ1 152 aa8.71□□□□□ -1.02
PTPRA-203ENST00000356147 THOC3Q96J01 351 aaKnown RBP8.71□□□□□ -1.02
PTPRA-203ENST00000356147 LOC102723971A0A1B0GUV8 181 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 ETV2O00321 342 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-203ENST00000356147 CDS2O95674 445 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 DEFA4P12838 97 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 RBM11P57052 281 aaKnown RBP8.7□□□□□ -1.02
PTPRA-203ENST00000356147 NXPH1P58417 271 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 PSG4Q00888 419 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 TLE4Q04727 773 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 ARL16Q0P5N6 197 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 TESK1Q15569 626 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 Q6ZRM9 215 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 PLPPR1Q8TBJ4 325 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 CHRNA10Q9GZZ6 450 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 OR51B6Q9H340 312 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 PLK3Q9H4B4 646 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 AURKAIP1Q9NWT8 199 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-203ENST00000356147 TAAR3PQ9P1P4 343 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 COL5A1P20908 1838 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-203ENST00000356147 MUC3AQ02505 3323 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 A0A1B0GW64 132 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 SLC22A20A6NK97 555 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 TSTD3H0UI37 97 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 HS3ST1O14792 307 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 SYNGR3O43761 229 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 IGLV3-19P01714 112 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 TK1P04183 234 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 GLB1P16278 677 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 CRYGSP22914 178 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 P2RY6Q15077 328 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 REC114Q7Z4M0 266 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 STX12Q86Y82 276 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 TMEM54Q969K7 222 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 RPUSD4Q96CM3 377 aaKnown RBP8.7□□□□□ -1.02
PTPRA-203ENST00000356147 ELOVL1Q9BW60 279 aa8.7□□□□□ -1.02
PTPRA-203ENST00000356147 A0A087WWC5 75 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 IGKV1-6A0A0C4DH72 117 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 CNOT4O95628 575 aaKnown RBP8.69□□□□□ -1.02
PTPRA-203ENST00000356147 MMP7P09237 267 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ZFP36L1Q07352 338 aaKnown RBP8.69□□□□□ -1.02
PTPRA-203ENST00000356147 C10orf128Q5T292 105 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 TGIF2LXQ8IUE1 241 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ADPRHL1Q8NDY3 354 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 OR4X1Q8NH49 305 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 RDH5Q92781 318 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 DKKL1Q9UK85 242 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 LAMP3Q9UQV4 416 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 ZNF732B4DXR9 585 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 CLDN34H7C241 214 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 PSG2P11465 335 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 GPM6AP51674 278 aa8.69□□□□□ -1.02
PTPRA-203ENST00000356147 TAS2R30P59541 319 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms