RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ARHGAP5-AS1Q96IT6 56 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 WDFY2Q96P53 400 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 SULT4A1Q9BR01 284 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 TMPRSS13Q9BYE2 586 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 RIMS4Q9H426 269 aaPredicted RBP12.8□□□□□ -0.36
TRIM13-201ENST00000356017 DIABLOQ9NR28 239 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 TAS2R3Q9NYW6 316 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 COMMD3Q9UBI1 195 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 DOCK11Q5JSL3 2073 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 TOX4O94842 621 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 MT-ND4P03905 459 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ZNF728P0DKX0 622 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 GZMHP20718 246 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 HNF1AP20823 631 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ZNF273Q14593 569 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 GAPTQ8N292 157 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 SLC25A38Q96DW6 304 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 PECRQ9BY49 303 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 GAL3ST2Q9H3Q3 398 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 METTL8Q9H825 291 aaKnown RBP12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ACANP16112 2415 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.79□□□□□ -0.365e-9■■■■□ 20.9
TRIM13-201ENST00000356017 POM121CA8CG34 1229 aa12.79□□□□□ -0.36
TRIM13-201ENST00000356017 SERPINE3A8MV23 424 aa12.79□□□□□ -0.36
TRIM13-201ENST00000356017 RBP4P02753 201 aa12.79□□□□□ -0.36
TRIM13-201ENST00000356017 HIST1H1DP16402 221 aaKnown RBP12.79□□□□□ -0.36
TRIM13-201ENST00000356017 MRPS15P82914 257 aaKnown RBP12.79□□□□□ -0.36
TRIM13-201ENST00000356017 MOGAT2Q3SYC2 334 aa12.79□□□□□ -0.36
TRIM13-201ENST00000356017 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
TRIM13-201ENST00000356017 ABCA2Q9BZC7 2435 aa12.79□□□□□ -0.36
TRIM13-201ENST00000356017 APOA1P02647 267 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 FAM120AOSQ5T036 256 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 UPRTQ96BW1 309 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 PCGF1Q9BSM1 259 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 UNKLQ9H9P5 680 aaKnown RBP12.78□□□□□ -0.36
TRIM13-201ENST00000356017 RAB9BQ9NP90 201 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM13-201ENST00000356017 F8P00451 2351 aa12.78□□□□□ -0.36
TRIM13-201ENST00000356017 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.36
TRIM13-201ENST00000356017 C17orf98A8MV24 154 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 MFNGO00587 321 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 GSTP1P09211 210 aaKnown RBP12.77□□□□□ -0.36
TRIM13-201ENST00000356017 MMP9P14780 707 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 GNB3P16520 340 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 CCL3L1P16619 93 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 GLP1RP43220 463 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 CDNFQ49AH0 187 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 Q71RC1 249 aaPredicted RBP12.77□□□□□ -0.36
TRIM13-201ENST00000356017 TCF23Q7RTU1 214 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 NANPQ8TBE9 248 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 DYRK2Q92630 601 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.36
TRIM13-201ENST00000356017 SLIRPQ9GZT3 109 aaKnown RBP12.77□□□□□ -0.36
TRIM13-201ENST00000356017 C12orf4Q9NQ89 552 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 OPN4Q9UHM6 478 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 AK3Q9UIJ7 227 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 KCNK7Q9Y2U2 307 aa12.77□□□□□ -0.36
TRIM13-201ENST00000356017 ZANQ9Y493 2812 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 A0A075B6Q4 140 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 KBTBD11-OT1A0A1B0GTJ5 212 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 RGS5O15539 181 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 XRCC3O43542 346 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 ORC5O43913 435 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 NAPSAO96009 420 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 CD3GP09693 182 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 PRTN3P24158 256 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 DLX6P56179 175 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 C6orf183Q5T699 404 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 ZNF554Q86TJ5 538 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 Q8N7P7 452 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 OR13A1Q8NGR1 328 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 OR4K15Q8NH41 348 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 MRGPRDQ8TDS7 321 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 ZMAT3Q9HA38 289 aaKnown RBP12.77□□□□□ -0.37
TRIM13-201ENST00000356017 CHMP1AQ9HD42 196 aaPredicted RBP12.77□□□□□ -0.37
TRIM13-201ENST00000356017 KCNIP1Q9NZI2 227 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 CDC42EP3Q9UKI2 254 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 MGAT4AQ9UM21 535 aa12.77□□□□□ -0.37
TRIM13-201ENST00000356017 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 MEX3AA1L020 520 aaKnown RBP12.76□□□□□ -0.37
TRIM13-201ENST00000356017 HPGDSO60760 199 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 AVPP01185 164 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 CGB3P0DN86 165 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 CGB7P0DN87 165 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 CDK2P24941 298 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 ERVFRD-1P60508 538 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 PITPNAQ00169 270 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 ARFRP1Q13795 201 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 HEPN1Q6WQI6 88 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 MOB1BQ7L9L4 216 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 VMO1Q7Z5L0 202 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
TRIM13-201ENST00000356017 MRPL30Q8TCC3 161 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms