RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CAMLGP49069 296 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 HIST1H3AP68431 136 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 MRPS34P82930 218 aaKnown RBP7.38□□□□□ -1.23
TRIM55-204ENST00000353317 PHLDA2Q53GA4 152 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 HIST2H3PS2Q5TEC6 136 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 FAM27BQ5VT28 67 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 HIST2H3AQ71DI3 136 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 RPRMLQ8N4K4 120 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 COMMD1Q8N668 190 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 Q8NA96 180 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 HSD17B11Q8NBQ5 300 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 OR2AE1Q8NHA4 323 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 TMEM45BQ96B21 275 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 SGK3Q96BR1 496 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 RSRP1Q9BUV0 290 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 C12orf49Q9H741 205 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 SLC2A9Q9NRM0 540 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 C19orf12Q9NSK7 152 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 NECAP2Q9NVZ3 263 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 PLEK2Q9NYT0 353 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 DKK4Q9UBT3 224 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 KALRNO60229 2985 aa7.38□□□□□ -1.23
TRIM55-204ENST00000353317 BORCS7-ASMTA0A0B4J1R7 106 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 A0A1B0GV50 99 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 FAM230AA0A1W2PPH8 454 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 FAM221AA4D161 298 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 SYNGR4O95473 234 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 IGHV2-5P01817 119 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 PRH1P02810 166 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 PMELP40967 661 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 SULT1A1P50225 295 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 OR2B8PP59922 312 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 ABCA11PQ4W5N1 156 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 ADAM5Q6NVV9 412 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 SEM1Q6ZVN7 128 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 KDF1Q8NAX2 398 aaPredicted RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 OR5L1Q8NGL2 311 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 MSI2Q96DH6 328 aaKnown RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 C18orf12Q96KH6 178 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF251Q9BRH9 671 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 PRRG4Q9BZD6 226 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 CLCF1Q9UBD9 225 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 METTL1Q9UBP6 276 aaKnown RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 FBXO7Q9Y3I1 522 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 A0A096LPE4 126 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 A0A1W2PPE2 198 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 A0A1W2PPZ6 126 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 SLC22A20A6NK97 555 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 GEMIN2O14893 280 aaKnown RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 GPR137BO60478 399 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 OR8U8P0C7N1 319 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 PPP1CCP36873 323 aaKnown RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 ASCL1P50553 236 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 FOXF2Q12947 444 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 RSU1Q15404 277 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF774Q6NX45 483 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 LIAT1Q6ZQX7 453 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 GPR137CQ8N3F9 429 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 LRTM2Q8N967 370 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 C9orf106Q8NAJ2 232 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 NAXEQ8NCW5 288 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 OR11L1Q8NGX0 322 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 AKR7LQ8NHP1 331 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 CPT1CQ8TCG5 803 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 INTS12Q96CB8 462 aaKnown RBP7.37□□□□□ -1.23
TRIM55-204ENST00000353317 C10orf35Q96D05 121 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 FOXB1Q99853 325 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 METTL9Q9H1A3 318 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 HSF4Q9ULV5 492 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 COL6A6A6NMZ7 2263 aa7.37□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF724A8MTY0 619 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 H7C1Q1 480 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 OR13C7P0DN81 318 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 NQO2P16083 231 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF32P17041 273 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 CHATP28329 748 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 ARF1P84077 181 aaKnown RBP7.36□□□□□ -1.23
TRIM55-204ENST00000353317 PSG4Q00888 419 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 PIGYQ3MUY2 71 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 GPR157Q5UAW9 335 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 FBXW12Q6X9E4 464 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 OR10AD1Q8NGE0 317 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 OR1J1Q8NGS3 322 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 CD300LFQ8TDQ1 290 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 TRIB1Q96RU8 372 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 SUCNR1Q9BXA5 334 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 SLC35B3Q9H1N7 401 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 RFNGQ9Y644 331 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 CADP27708 2225 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 PKD1L2Q7Z442 2459 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 AQP7O14520 342 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 ST8SIA3O43173 380 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 MMP7P09237 267 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-204ENST00000353317 NR2C1P13056 603 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 DTYMKP23919 212 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 DUSP1P28562 367 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 PRR30Q53SZ7 412 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms