RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PLEKHJ1Q9NW61 149 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 GYPAP02724 150 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 SLC35E2P0CK97 266 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 IGLC2P0DOY2 106 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 VAMP3Q15836 100 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 SLAMF6Q96DU3 332 aa11.46□□□□□ -0.57
IFT88-202ENST00000351808 IGKV1-9A0A0C4DH69 117 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 CLEC18AA5D8T8 446 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 CHST1O43916 411 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 IFNA5P01569 189 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 POU2F2P09086 479 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 MEF2BQ02080 365 aaPredicted RBP11.46□□□□□ -0.58
IFT88-202ENST00000351808 MSMO1Q15800 293 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 FFAR4Q5NUL3 377 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 CLEC18CQ8NCF0 446 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 CADM4Q8NFZ8 388 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 ZNF286AQ9HBT8 521 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.58
IFT88-202ENST00000351808 ST3GAL6Q9Y274 331 aa11.46□□□□□ -0.58
IFT88-202ENST00000351808 TET1Q8NFU7 2136 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 IFNA1P01562 189 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 LCN2P80188 198 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 TCEAL8Q8IYN2 117 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 FAM103A1Q9BTL3 118 aaKnown RBP11.45□□□□□ -0.58
IFT88-202ENST00000351808 SAMD10Q9BYL1 202 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 STARD5Q9NSY2 213 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 KLHL13Q9P2N7 655 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 SH2D1BO14796 132 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 HMGB3O15347 200 aaKnown RBP11.45□□□□□ -0.58
IFT88-202ENST00000351808 SEC13P55735 322 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 MESP2Q0VG99 397 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 SGCBQ16585 318 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 TCTN1Q2MV58 587 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 C1orf174Q8IYL3 243 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 CA13Q8N1Q1 262 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 C16orf52Q8NHV5 167 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 PSMF1Q92530 271 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 STARD4Q96DR4 205 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 NECAP2Q9NVZ3 263 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 BET1LQ9NYM9 111 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 TBX21Q9UL17 535 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 WNT6Q9Y6F9 365 aa11.45□□□□□ -0.58
IFT88-202ENST00000351808 DUXBA0A1W2PPF3 345 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 AQP7P3A6NL99 342 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 ADAM20O43506 726 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 SERPINA7P05543 415 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 C8AP07357 584 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 CD46P15529 392 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 ZNF17P17021 662 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 LHFPL4Q7Z7J7 247 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 LAMA2P24043 3122 aaKnown RBP11.44□□□□□ -0.58
IFT88-202ENST00000351808 ATG2AQ2TAZ0 1938 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 TRAV36DV7A0A075B6V5 113 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 F2Z2F3 143 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 TNFSF4P23510 183 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 EPHA8P29322 1005 aaPredicted RBP11.44□□□□□ -0.58
IFT88-202ENST00000351808 EFNA3P52797 238 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 BAXQ07812 192 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 KISS1Q15726 138 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 TMEM52BQ4KMG9 183 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 MORN2Q502X0 79 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 UEVLDQ8IX04 471 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 Q8N976 141 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 MRPL30Q8TCC3 161 aaKnown RBP11.44□□□□□ -0.58
IFT88-202ENST00000351808 ZDHHC11Q9H8X9 412 aa11.44□□□□□ -0.58
IFT88-202ENST00000351808 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
IFT88-202ENST00000351808 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 H0YGG7 62 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 MMP23AO75900 390 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 EFEMP2O95967 443 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 ARF3P61204 181 aaPredicted RBP11.43□□□□□ -0.58
IFT88-202ENST00000351808 TMEM267Q0VDI3 215 aaPredicted RBP11.43□□□□□ -0.58
IFT88-202ENST00000351808 FNDC7Q5VTL7 733 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 LHX4Q969G2 390 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 CLUHP3Q96NS8 147 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 ZBP1Q9H171 429 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 IL19Q9UHD0 177 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 TGFBR3LH3BV60 316 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 GDF9O60383 454 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 PSG1P11464 419 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 BMP5P22003 454 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
IFT88-202ENST00000351808 ZNF695Q8IW36 515 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 OR4F5Q8NH21 305 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 SCGB1C1Q8TD33 95 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 OR4F4Q96R69 305 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 GPHA2Q96T91 129 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 OR10A5Q9H207 317 aa11.43□□□□□ -0.58
IFT88-202ENST00000351808 C3orf85A0A1B0GTC6 90 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 NUDT14O95848 222 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 MPLP40238 635 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 RIPPLY3P57055 190 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 PPP1CBP62140 327 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms