RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 A0A1W2PRD5 423 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 A0A1W2PRF3 423 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 A0A1W2PRM7 423 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 ERVS71-1P61550 626 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 SLC25A45Q8N413 288 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 OR4S2Q8NH73 311 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 TRAF4Q9BUZ4 470 aaPredicted RBP13.99□□□□□ -0.17
PTPN11-201ENST00000351677 TTTY12Q9BZ98 90 aa13.99□□□□□ -0.17
PTPN11-201ENST00000351677 SIPA1L1O43166 1804 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 CD1AP06126 327 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 ATP6V1FQ16864 119 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 MPV17LQ2QL34 196 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 OR5A2Q8NGI9 324 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 RPL36A-HNRNPH2H7BZ11 118 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 BCL2L2Q92843 193 aaPredicted RBP13.98□□□□□ -0.17
PTPN11-201ENST00000351677 G6PCP35575 357 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 CCDC88CQ9P219 2028 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 ORM2P19652 201 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 OR1K1Q8NGR3 316 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 TMPRSS5Q9H3S3 457 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 AAMDCQ9H7C9 122 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 IGHV3OR15-7A0A075B7D8 119 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 HIST1H3AP68431 136 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 FAM78BQ5VT40 261 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 DTD1Q8TEA8 209 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 OR2W1Q9Y3N9 320 aa13.98□□□□□ -0.17
PTPN11-201ENST00000351677 TRBV5-5A0A0J9YX44 114 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 PSG2P11465 335 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 CXCL2P19875 107 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 PSG4Q00888 419 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 PMS2CLQ68D20 193 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 MYOFQ9NZM1 2061 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 SP1P08047 785 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 HLA-GP17693 338 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 AESQ08117 197 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
PTPN11-201ENST00000351677 FBXW9Q5XUX1 488 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 GPX7Q96SL4 187 aaPredicted RBP13.97□□□□□ -0.17
PTPN11-201ENST00000351677 IGHV1-45A0A0A0MS14 117 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 KIAA1324LA8MWY0 1029 aaPredicted RBP13.97□□□□□ -0.17
PTPN11-201ENST00000351677 SMIM10L1P0DMW3 83 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 FHL5Q5TD97 284 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 DHRS7BQ6IAN0 325 aaPredicted RBP13.97□□□□□ -0.17
PTPN11-201ENST00000351677 SMIM10Q96HG1 83 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 HSD17B10Q99714 261 aaKnown RBP13.97□□□□□ -0.17
PTPN11-201ENST00000351677 OR2J1Q9GZK6 312 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 SH2D2AQ9NP31 389 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 PGA4P0DJD7 388 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 RCC1P18754 421 aaPredicted RBP13.97□□□□□ -0.17
PTPN11-201ENST00000351677 LINC00862A6NCI5 91 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 LY86O95711 162 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 TMEM50BP56557 158 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 GHITMQ9H3K2 345 aa13.97□□□□□ -0.17
PTPN11-201ENST00000351677 FAM27BQ5VT28 67 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 ETFRF1Q6IPR1 90 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 OR1L4Q8NGR5 311 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 ADIPOR1Q96A54 375 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 PTX4Q96A99 478 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 TNFSF18Q9UNG2 199 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 MBPP02686 304 aaPredicted RBP13.96□□□□□ -0.17
PTPN11-201ENST00000351677 RBM11P57052 281 aaKnown RBP13.96□□□□□ -0.17
PTPN11-201ENST00000351677 TNXAQ16473 311 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 OR4F17Q8NGA8 305 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 LOC102723971A0A1B0GUV8 181 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 FAM157AC9JC47 383 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 RPS4Y1P22090 263 aaKnown RBP13.96□□□□□ -0.17
PTPN11-201ENST00000351677 PRRX1P54821 245 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 TOMM20LQ6UXN7 152 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 SSMEM1Q8WWF3 244 aa13.96□□□□□ -0.17
PTPN11-201ENST00000351677 IGLV1-36A0A0B4J1U3 117 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 FCGR3AP08637 254 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 FSTP19883 344 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 SLC23A3Q6PIS1 610 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 TRAV38-1A0A0B4J264 116 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 A0A1W2PN81 502 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 DNPH1O43598 174 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 CD200R1LQ6Q8B3 271 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 SLC25A38Q96DW6 304 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 KCNK17Q96T54 332 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 ABHD14AQ9BUJ0 271 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 RAB33BQ9H082 229 aa13.96□□□□□ -0.18
PTPN11-201ENST00000351677 RCC2Q9P258 522 aaKnown RBP13.96□□□□□ -0.18
PTPN11-201ENST00000351677 FCN1O00602 326 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 OR2J3O76001 311 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 RP1P56715 2156 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 RNASEKQ6P5S7 137 aaKnown RBP13.95□□□□□ -0.18
PTPN11-201ENST00000351677 NOL4LQ96MY1 436 aaPredicted RBP13.95□□□□□ -0.18
PTPN11-201ENST00000351677 SF3B6Q9Y3B4 125 aaKnown RBP13.95□□□□□ -0.18
PTPN11-201ENST00000351677 LRRC3CA6NJW4 275 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 C17orf51A8MQB3 221 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 MS4A18H0YCH9 400 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 MS4A18Q3C1V0 323 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 RNF122Q9H9V4 155 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 SEBOXQ9HB31 216 aaPredicted RBP13.95□□□□□ -0.18
PTPN11-201ENST00000351677 PARD6AQ9NPB6 346 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 OR1B1Q8NGR6 318 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 ZDHHC16Q969W1 377 aa13.95□□□□□ -0.18
PTPN11-201ENST00000351677 PIN1P1O15428 100 aa13.94□□□□□ -0.18
PTPN11-201ENST00000351677 LYZP61626 148 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms