RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
SMARCA2-203ENST00000349721 PPP1CCP36873 323 aaKnown RBP13.18□□□□□ -0.3
SMARCA2-203ENST00000349721 PATE1Q8WXA2 126 aa13.18□□□□□ -0.3
SMARCA2-203ENST00000349721 MIXL1Q9H2W2 232 aa13.18□□□□□ -0.3
SMARCA2-203ENST00000349721 NKX2-6A6NCS4 301 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 ID1P41134 155 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 RAE1P78406 368 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 LINC00596Q86U02 117 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 OR8I2Q8N0Y5 310 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 ALX4Q9H161 411 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 MRM2Q9UI43 246 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 PLPP3O14495 311 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 AMY1AP04745 511 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 MUC1P15941 1255 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 TMEM50BP56557 158 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 NFAM1Q8NET5 270 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 UBTD1Q9HAC8 227 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 SLC6A13Q9NSD5 602 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 B4E171 279 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 IGLV3-27P01718 113 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 MUC15Q8N387 334 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 CYB561D1Q8N8Q1 229 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 LYZL6O75951 148 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 GAPDHP04406 335 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 LGALS3P17931 250 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 MAS1LP35410 378 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 PMELP40967 661 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 LSM10Q969L4 123 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 C1RLQ9NZP8 487 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 LILRA5A6NI73 299 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 IGLV3-25P01717 112 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 COX7A1P24310 79 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 CIRBPQ14011 172 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 TMEM183AQ8IXX5 376 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 PAXXQ9BUH6 204 aa13.17□□□□□ -0.3
SMARCA2-203ENST00000349721 K7EQS6 105 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 GPR3P46089 330 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 OR11G2Q8NGC1 345 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 OR8B12Q8NGG6 310 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 A0A1B0GTH9 108 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 NPIPB6E9PJ23 425 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 SLC23A3Q6PIS1 610 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 PRNTQ86SH4 94 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 VCX2Q9H322 139 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 HIGD1AQ9Y241 93 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 CXorf51AA0A1B0GTR3 108 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 OR8B3Q8NGG8 313 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 ZNF735P0CB33 412 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 P2RX4Q99571 388 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 CCL28Q9NRJ3 127 aa13.16□□□□□ -0.3
SMARCA2-203ENST00000349721 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 A0A1B0GTL3 188 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 A0A1B0GV90 55 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 PLA2G10O15496 165 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 IL4P05112 153 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 GLULP15104 373 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 GZMHP20718 246 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 ADAD2Q8NCV1 583 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 CCDC88AQ3V6T2 1871 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 TRAV38-1A0A0B4J264 116 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 SOCS1O15524 211 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 SOD3P08294 240 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 SMIM13P0DJ93 91 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 WIPI1Q5MNZ9 446 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 IBA57Q5T440 356 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 LYZL2Q7Z4W2 148 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 FZD5Q13467 585 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 PRSS8Q16651 343 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 ASB10Q8WXI3 467 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
SMARCA2-203ENST00000349721 C7orf66A4D0T2 115 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 CA11O75493 328 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 ZNF83P51522 516 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 HERPUD1Q15011 391 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 ZNF506Q5JVG8 444 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 MSRB3Q8IXL7 192 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 ASB16Q96NS5 453 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 SLC26A1Q9H2B4 701 aa13.15□□□□□ -0.31
SMARCA2-203ENST00000349721 CEACAM5P06731 702 aa13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 MRPL18Q9H0U6 180 aaKnown RBP13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 FOXC1Q12948 553 aa13.14□□□□□ -0.31
SMARCA2-203ENST00000349721 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms