RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 WNT2BQ93097 391 aa13.24□□□□□ -0.29
TNFSF13-202ENST00000349228 TCEAL3Q969E4 200 aa13.24□□□□□ -0.29
TNFSF13-202ENST00000349228 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
TNFSF13-202ENST00000349228 USB1Q9BQ65 265 aaKnown RBP13.24□□□□□ -0.29
TNFSF13-202ENST00000349228 H0Y980 276 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 HSPA12AO43301 675 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 PRH1P02810 166 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 GLI4P10075 376 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 SLC25A6P12236 298 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 NHLH2Q02577 135 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 BAXQ07812 192 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 AVPI1Q5T686 147 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 ZNF880Q6PDB4 577 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 GAPTQ8N292 157 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 HES7Q9BYE0 225 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 LYRM2Q9NU23 88 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 ZNF175Q9Y473 711 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 RTTNQ86VV8 2226 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 MT-CO3P00414 261 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 F12P00748 615 aaPredicted RBP13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 CCL2P13500 99 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 LMO1P25800 156 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 MEOX1P50221 254 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 ID3Q02535 119 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 ZNF616Q08AN1 781 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 CLN3Q13286 438 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 C15orf54Q8N8G6 183 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 SUMF2Q8NBJ7 301 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 MDS2Q8NDY4 140 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 BIN3Q9NQY0 253 aa13.23□□□□□ -0.29
TNFSF13-202ENST00000349228 BTBD17A6NE02 478 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 J3KRW8 73 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 NGFP01138 241 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 FOLR2P14207 255 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 CD46P15529 392 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 FOXG1P55316 489 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 NMSQ5H8A3 153 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 LINC00696Q6ZRV3 163 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 FAM58AQ8N1B3 248 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 OR1K1Q8NGR3 316 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 MRPL30Q8TCC3 161 aaKnown RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 TUBA4BQ9H853 241 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 PLA2G3Q9NZ20 509 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 TREM2Q9NZC2 230 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 A0A1B0GWJ7 208 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 ZNF503-AS2A6NEH8 195 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 C9JQL5 133 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 NPIPB11E5RHQ5 1161 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 CLN5O75503 358 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 CD59P13987 128 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 MDH2P40926 338 aaKnown RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 RAB13P51153 203 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 S100A12P80511 92 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 HERPUD1Q15011 391 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 CLEC9AQ6UXN8 241 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 MOB1BQ7L9L4 216 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 NUFIP2Q7Z417 695 aaKnown RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 Q8IYB0 196 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 ZFP62Q8NB50 900 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 BCL2L2Q92843 193 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 GNPNAT1Q96EK6 184 aaPredicted RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 AKR1E2Q96JD6 320 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 CABLES2Q9BTV7 478 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 SCRT1Q9BWW7 348 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 CHTOPQ9Y3Y2 248 aaKnown RBP13.22□□□□□ -0.29
TNFSF13-202ENST00000349228 TNRC6AQ8NDV7 1962 aaKnown RBP13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 USP34Q70CQ2 3546 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 LNP1A1A4G5 178 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 J3QT63 122 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 K7N7A8 449 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 DEGS1O15121 323 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 SYNGR1O43759 233 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 ID4P47928 161 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 OR8G1Q15617 311 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 FBXW9Q5XUX1 488 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 TMEM252Q8N6L7 170 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 OR10J5Q8NHC4 309 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 EGLN1Q9GZT9 426 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 EIF5A2Q9GZV4 153 aaKnown RBP13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 CRIM1Q9NZV1 1036 aa13.21□□□□□ -0.29
TNFSF13-202ENST00000349228 A0A1W2PNU3 283 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 FAM24AA6NFZ4 105 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 ADAM20O43506 726 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 SP9P0CG40 484 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 PPT1P50897 306 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 HLA-DRB3P79483 266 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 MRPL49Q13405 166 aaKnown RBP13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 TSC22D1Q15714 1073 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 PCSK4Q6UW60 755 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 LINC00518Q8N0U6 118 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 BATF2Q8N1L9 274 aa13.2□□□□□ -0.3
TNFSF13-202ENST00000349228 HSD17B11Q8NBQ5 300 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms