RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 C3orf85A0A1B0GTC6 90 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 OR5H1A6NKK0 313 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 H0YL77 283 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 MKRN2OSH3BPM6 223 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 CRYABP02511 175 aaKnown RBP17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 GLI4P10075 376 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 SMCO1Q147U7 214 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 ZNF146Q15072 292 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 PCSK4Q6UW60 755 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 FOXRED2Q8IWF2 684 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 BAP18Q8IXM2 172 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 RPRMLQ8N4K4 120 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 FAM169BQ8N8A8 192 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 SECTM1Q8WVN6 248 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 TP53RKQ96S44 253 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 SLC5A7Q9GZV3 580 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 SESN1Q9Y6P5 492 aa17.27■□□□□ 0.36
CHRNA3-202ENST00000348639 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 GPR31O00270 319 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 NXPH2O95156 264 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 OR2H2O95918 312 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 SRPXP78539 464 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 HLA-DRB3P79483 266 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 SHEQ5VZ18 495 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 SLX1AQ9BQ83 275 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 TINAGQ9UJW2 476 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 AMDHD2Q9Y303 409 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 IGKV1D-13A0A0B4J2D9 117 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 SLC33A1O00400 549 aaPredicted RBP17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 GRPP07492 148 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 IGKV1-13P0DP09 117 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 HKR1P10072 659 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 RCC1P18754 421 aaPredicted RBP17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 KITLGP21583 273 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 EIF2S3LQ2VIR3 472 aaKnown RBP17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 ZNF818PQ6ZRF7 136 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 HSD17B13Q7Z5P4 300 aaPredicted RBP17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 LHFPL5Q8TAF8 219 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 SCNM1Q9BWG6 230 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 TMEM222Q9H0R3 208 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 TMED3Q9Y3Q3 217 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 FAM215AQ9Y5M1 114 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 PRR14LQ5THK1 2151 aa17.26■□□□□ 0.35
CHRNA3-202ENST00000348639 IGHV2OR16-5A0A0B4J2B6 119 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 IGHV1-18A0A0C4DH31 117 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 A8MXK9 166 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 MLNRO43193 412 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 FGF2P09038 288 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 SPIN3Q5JUX0 258 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 TBC1D26Q86UD7 250 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 C1orf174Q8IYL3 243 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 GAPTQ8N292 157 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 EIF4E3Q8N5X7 224 aaKnown RBP17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 CABLES2Q9BTV7 478 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 ANKRD11Q6UB99 2663 aaPredicted RBP17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 SIRPB1O00241 398 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 SH2D1BO14796 132 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 ZNF718Q3SXZ3 478 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 ALKBH2Q6NS38 261 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 ZNF497Q6ZNH5 498 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 MOB1BQ7L9L4 216 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 ABHD17AQ96GS6 310 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 CXXC4Q9H2H0 198 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 BARX1Q9HBU1 254 aaPredicted RBP17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 HES4Q9HCC6 221 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 SLC25A15Q9Y619 301 aa17.25■□□□□ 0.35
CHRNA3-202ENST00000348639 TAAR5O14804 337 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 MBPP02686 304 aaPredicted RBP17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 MBNL2Q5VZF2 373 aaKnown RBP17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 SLC35G3Q8N808 338 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 OR10J5Q8NHC4 309 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 LRRC20Q8TCA0 184 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 TMEM56Q96MV1 263 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 DNTTIP1Q9H147 329 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 ZFP57Q9NU63 452 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 LSM5Q9Y4Y9 91 aaKnown RBP17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 TMEM56-RWDD3S4R434 201 aa17.24■□□□□ 0.35
CHRNA3-202ENST00000348639 K7EPK0 472 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 TIMM8AO60220 97 aaPredicted RBP17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 APC2O95996 2303 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 RPL12P30050 165 aaKnown RBP17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 C1orf185Q5T7R7 199 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 ZNF324BQ6AW86 544 aaPredicted RBP17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 FAM180AQ6UWF9 173 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 H1FOOQ8IZA3 346 aaPredicted RBP17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 FAM71E2Q8N5Q1 922 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 BVESQ8NE79 360 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 PLPPR1Q8TBJ4 325 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 FZR1Q9UM11 496 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 OR2W1Q9Y3N9 320 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 GFRA3O60609 400 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 SCGB1D2O95969 90 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 ZP3P21754 424 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 GCH1P30793 250 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 TIMP3P35625 211 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 TMEM268Q5VZI3 342 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 FIP1L1Q6UN15 594 aaKnown RBP17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 MEX3BQ6ZN04 569 aaKnown RBP17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 C11orf53Q8IXP5 236 aa17.23■□□□□ 0.35
CHRNA3-202ENST00000348639 CMTM1Q8IZ96 169 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms