RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CD59P13987 128 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 DTYMKP23919 212 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 PPT1P50897 306 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 RAB1AP62820 205 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 OR1C1Q15619 314 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TM4SF20Q53R12 229 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 SPSB3Q6PJ21 355 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 RBMS3Q6XE24 437 aaKnown RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 Q6ZR03 302 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF100Q8IYN0 542 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 LRTM2Q8N967 370 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 MRPL30Q8TCC3 161 aaKnown RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 KCNE4Q8WWG9 221 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 C5orf30Q96GV9 206 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 BOD1Q96IK1 185 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 VSIRQ9H7M9 311 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 BCO1Q9HAY6 547 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 RYDENQ9NUL5 291 aaKnown RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ANKRD11Q6UB99 2663 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 IGKV3D-15A0A087WSY6 115 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 H3BP45 60 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 RPL36A-HNRNPH2H7BZ11 118 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ADAM20O43506 726 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 DANCRP0C864 163 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 CBR1P16152 277 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 FUT3P21217 361 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ARL16Q0P5N6 197 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TRA2AQ13595 282 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 CNN3Q15417 329 aaKnown RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 UTF1Q5T230 341 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 RIPPLY2Q5TAB7 128 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 OR2T2Q6IF00 324 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 HAGHLQ6PII5 290 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TMEM182Q6ZP80 229 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 UBALD2Q8IYN6 164 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 SVBPQ8N300 66 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 UBAC2Q8NBM4 344 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 PRDM14Q9GZV8 571 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 IL36GQ9NZH8 169 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 FBXO7Q9Y3I1 522 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 KLF2Q9Y5W3 355 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 B4E171 279 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 SSSCA1O60232 199 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TSPAN9O75954 239 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 MT-CO3P00414 261 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF44P15621 663 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 CA6P23280 308 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 UCP2P55851 309 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 EWSR1Q01844 656 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TLE1Q04724 770 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 EIF3IQ13347 325 aaKnown RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 KRTCAP3Q53RY4 240 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 DCAF10Q5QP82 559 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 WDR73Q6P4I2 378 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 DHRS13Q6UX07 377 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TMEM217Q8N7C4 229 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 SUMF2Q8NBJ7 301 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 OR10Z1Q8NGY1 313 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 CPNE4Q96A23 557 aaPredicted RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 WDYHV1Q96HA8 205 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 GINS3Q9BRX5 216 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 TMEM222Q9H0R3 208 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ZC4H2Q9NQZ6 224 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 COA4Q9NYJ1 87 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 RNF115Q9Y4L5 304 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 CACNA1GO43497 2377 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 CER1O95813 267 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 CYC1P08574 325 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 WT1P19544 449 aaPredicted RBP5.13□□□□□ -1.59
CLCN3-201ENST00000347613 TAGLN2P37802 199 aaKnown RBP5.13□□□□□ -1.59
CLCN3-201ENST00000347613 MALLQ13021 153 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF154Q13106 437 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 HNF4GQ14541 408 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 NMSQ5H8A3 153 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 FBXW12Q6X9E4 464 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 PRR18Q8N4B5 295 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ZFP62Q8NB50 900 aaPredicted RBP5.13□□□□□ -1.59
CLCN3-201ENST00000347613 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 PARP11Q9NR21 331 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 CADP27708 2225 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ICE1Q9Y2F5 2266 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 CACNA1HO95180 2353 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 A6NLC8 198 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF727A8MUV8 499 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 TRDCB7Z8K6 153 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 GLAP06280 429 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 JMJD7P0C870 316 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 OR13C7P0DN81 318 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 PRKACAP17612 351 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 MPLP40238 635 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF616Q08AN1 781 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 CEACAM21Q3KPI0 293 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ABCA11PQ4W5N1 156 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF324BQ6AW86 544 aaPredicted RBP5.13□□□□□ -1.59
CLCN3-201ENST00000347613 TMEM211Q6ICI0 200 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 IL34Q6ZMJ4 242 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 HAPLN4Q86UW8 402 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 OR5P3Q8WZ94 311 aa5.13□□□□□ -1.59
CLCN3-201ENST00000347613 TMEM45BQ96B21 275 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms