RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LSMEM1Q8N8F7 131 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 TMEM191AQ9H0A3 160 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 ZMAT5Q9UDW3 170 aaKnown RBP20.27■□□□□ 0.84
NPAS3-201ENST00000346562 ACAA2P42765 397 aaKnown RBP20.27■□□□□ 0.84
NPAS3-201ENST00000346562 BHLHA9Q7RTU4 235 aa20.27■□□□□ 0.84
NPAS3-201ENST00000346562 SLC35B1P78383 322 aa20.27■□□□□ 0.83
NPAS3-201ENST00000346562 TMPRSS3P57727 454 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 KRTCAP3Q53RY4 240 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 OR10G8Q8NGN5 311 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 P2RX4Q99571 388 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 FLRT3Q9NZU0 649 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 CBY1Q9Y3M2 126 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 RPL36A-HNRNPH2H7BZ11 118 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 HYAL3O43820 417 aaPredicted RBP20.26■□□□□ 0.83
NPAS3-201ENST00000346562 G6PCP35575 357 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 LPAR2Q9HBW0 351 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 AUP1Q9Y679 476 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 OGG1O15527 345 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 RHBDL1O75783 438 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 PSG6Q00889 435 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 SLC35E4Q6ICL7 350 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 MDP1Q86V88 176 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 OR2W1Q9Y3N9 320 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 CSN3P07498 182 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 DAOP14920 347 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 LOXL3P58215 753 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 ELOBQ15370 118 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 LIMS2Q7Z4I7 341 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 OR10D4PQ8NGN7 298 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 LAMA4Q16363 1823 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 B4E171 279 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 SIAH2O43255 324 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 CHST1O43916 411 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 BGLAPP02818 100 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 TSPAN7P41732 249 aa20.26■□□□□ 0.83
NPAS3-201ENST00000346562 GCSHP23434 173 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 CLEC18BQ6UXF7 455 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 SMRP1Q8NCR6 262 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 SRD5A3Q9H8P0 318 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 PDE6DO43924 150 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 PPYP01298 95 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 MELTFP08582 738 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 ERVS71-1P61550 626 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 BSXQ3C1V8 233 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 C16orf82Q7Z2V1 217 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 TCRBV16S1A1N1A0A5B0 115 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 FOXB2Q5VYV0 432 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 CCL28Q9NRJ3 127 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 HIGD1AQ9Y241 93 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 OR1L6Q8NGR2 347 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 ANGPTL4Q9BY76 406 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 FRRS1LQ9P0K9 344 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 OR51B2Q9Y5P1 312 aa20.25■□□□□ 0.83
NPAS3-201ENST00000346562 C9orf172C9J069 976 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 RPS4XP62701 263 aaKnown RBP20.24■□□□□ 0.83
NPAS3-201ENST00000346562 TEX30Q5JUR7 227 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 LIPGQ9Y5X9 500 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 HMSDA8MTL9 139 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 SOCS1O15524 211 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 DLX1P56177 255 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 OR8D4Q8NGM9 314 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 SF3B6Q9Y3B4 125 aaKnown RBP20.24■□□□□ 0.83
NPAS3-201ENST00000346562 DOCK1Q14185 1865 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 COL10A1Q03692 680 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 PET117Q6UWS5 81 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 LRP11Q86VZ4 500 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 FAM222BQ8WU58 562 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 SSMEM1Q8WWF3 244 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 ZNF107Q9UII5 783 aaPredicted RBP20.24■□□□□ 0.83
NPAS3-201ENST00000346562 MED19A0JLT2 244 aaPredicted RBP20.24■□□□□ 0.83
NPAS3-201ENST00000346562 CD1BP29016 333 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 CXorf1O96002 111 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 ZNF658BQ4V348 819 aaPredicted RBP20.24■□□□□ 0.83
NPAS3-201ENST00000346562 MYOZ3Q8TDC0 251 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 WIPI2Q9Y4P8 454 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
NPAS3-201ENST00000346562 SRSF10O75494 262 aaKnown RBP20.23■□□□□ 0.83
NPAS3-201ENST00000346562 SPINK2P20155 84 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 XAF1Q6GPH4 301 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 STARD4Q96DR4 205 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 M0R143 59 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 HLA-DRB5Q30154 266 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 NXF2Q9GZY0 626 aaKnown RBP20.23■□□□□ 0.83
NPAS3-201ENST00000346562 SMPD2O60906 423 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 CLDN18P56856 261 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 EBLN2Q6P2I7 272 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 A0A1B0GU03 582 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 SULT1A1P50225 295 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 TSPO2Q5TGU0 170 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 OR2T10Q8NGZ9 312 aa20.23■□□□□ 0.83
NPAS3-201ENST00000346562 FGF11Q92914 225 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 ZNF714Q96N38 554 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 LPAR5Q9H1C0 372 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 MSL2Q9HCI7 577 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 PATE3B3GLJ2 98 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 TEPPQ6URK8 271 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 RNF224P0DH78 156 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 PPP1CCP36873 323 aaKnown RBP20.22■□□□□ 0.83
NPAS3-201ENST00000346562 MVDP53602 400 aa20.22■□□□□ 0.83
NPAS3-201ENST00000346562 OR10AC1Q8NH08 325 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms