RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PSG11Q9UQ72 335 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 SYNGR3O43761 229 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 OR7C2O60412 319 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 APOBEC3AP31941 199 aaPredicted RBP9.51□□□□□ -0.89
CLCN6-202ENST00000346436 CSF2RBP32927 897 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 MOGAT2Q3SYC2 334 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 C2orf50Q96LR7 162 aa9.51□□□□□ -0.89
CLCN6-202ENST00000346436 ARPC4-TTLL3A0A0A6YYG9 625 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 RNASEK-C17orf49H0YIS7 233 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 SIAH2O43255 324 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 OR4C13Q8NGP0 309 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 POM121Q96HA1 1249 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 RHOFQ9HBH0 211 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 MTCH1Q9NZJ7 389 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 A0A1W2PS18 150 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 DHRS7BQ6IAN0 325 aaPredicted RBP9.5□□□□□ -0.89
CLCN6-202ENST00000346436 C9orf40Q8IXQ3 194 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 C10orf35Q96D05 121 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 OR51I2Q9H344 312 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 J3QT63 122 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 SSSCA1O60232 199 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 RAB9AP51151 201 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 NDUFA6P56556 154 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 ECSCRQ19T08 205 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 HIKESHIQ53FT3 197 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 SPANXN5Q5MJ07 72 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 MDP1Q86V88 176 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 BVESQ8NE79 360 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 HSD17B10Q99714 261 aaKnown RBP9.5□□□□□ -0.89
CLCN6-202ENST00000346436 TINAGQ9UJW2 476 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 UTRNP46939 3433 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 OOEPA6NGQ2 149 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 TO15178 435 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 ORM1P02763 201 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 CEACAM6P40199 344 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 RPL31P62899 125 aaKnown RBP9.5□□□□□ -0.89
CLCN6-202ENST00000346436 MMDQ15546 238 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 KISS1Q15726 138 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 RRN3P1Q2M238 152 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 TMEM268Q5VZI3 342 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 OR5M8Q8NGP6 311 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 HS3ST3B1Q9Y662 390 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
CLCN6-202ENST00000346436 BGLAPP02818 100 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 HIST1H1DP16402 221 aaKnown RBP9.5□□□□□ -0.89
CLCN6-202ENST00000346436 LOXL3P58215 753 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 SSBP1Q04837 148 aaKnown RBP9.5□□□□□ -0.89
CLCN6-202ENST00000346436 IZUMO4Q1ZYL8 232 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 FAAP24Q9BTP7 215 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 GP6Q9HCN6 339 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
CLCN6-202ENST00000346436 A0A1W2PQM1 296 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 HMSDA8MTL9 139 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 KLF4O43474 513 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 FCGR3BO75015 233 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 ADAM11O75078 769 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-202ENST00000346436 TGFAP01135 160 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 GAPDHP04406 335 aaKnown RBP9.49□□□□□ -0.89
CLCN6-202ENST00000346436 PHYHD1Q5SRE7 291 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 PCSK4Q6UW60 755 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 FAM222BQ8WU58 562 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 PIPOXQ9P0Z9 390 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 KLK13Q9UKR3 277 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 UMAD1C9J7I0 102 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 CA11O75493 328 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 TAGLN2P37802 199 aaKnown RBP9.49□□□□□ -0.89
CLCN6-202ENST00000346436 CCL8P80075 99 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 ZNF816Q0VGE8 651 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-202ENST00000346436 OR1L1Q8NH94 360 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 SSC4DQ8WTU2 575 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 RTN4IP1Q8WWV3 396 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-202ENST00000346436 C12orf57Q99622 126 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 OR2H1Q9GZK4 316 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 SFTA3P0C7M3 94 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 UBALD1Q8TB05 177 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 Q8WTZ3 238 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 SLC17A5Q9NRA2 495 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 OR8B12Q8NGG6 310 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 RFESDQ8TAC1 157 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 ASB10Q8WXI3 467 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 ADAT3Q96EY9 351 aaPredicted RBP9.49□□□□□ -0.89
CLCN6-202ENST00000346436 NIT2Q9NQR4 276 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 TMEM38BQ9NVV0 291 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 VSIG4Q9Y279 399 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 PTPRDP23468 1912 aa9.49□□□□□ -0.89
CLCN6-202ENST00000346436 LOC105371242A0A075B767 164 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 H3BP45 60 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 UPK3AO75631 287 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 HAND1O96004 215 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 CCL2P13500 99 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 DAOP14920 347 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 TSPO2Q5TGU0 170 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 GPR61Q9BZJ8 451 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 ACTR3CQ9C0K3 210 aaPredicted RBP9.48□□□□□ -0.89
CLCN6-202ENST00000346436 A0A0G2JK05 382 aa9.48□□□□□ -0.89
CLCN6-202ENST00000346436 ELLP55199 621 aaPredicted RBP9.48□□□□□ -0.89
CLCN6-202ENST00000346436 H2BFSP57053 126 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms