RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 C17orf98A8MV24 154 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 RNASEK-C17orf49H0YIS7 233 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 BLVRBP30043 206 aaPredicted RBP17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 DLX6P56179 175 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 SLC35E4Q6ICL7 350 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 GPR141Q7Z602 305 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 BCL6BQ8N143 479 aaPredicted RBP17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 LPAR5Q9H1C0 372 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 UNKLQ9H9P5 680 aaKnown RBP17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 RAB22AQ9UL26 194 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 C2CD3Q4AC94 2353 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 TMEM30CPA0ZSE6 113 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 TFAP2AP05549 437 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 CFPP27918 469 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 VEGFCP49767 419 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 ZNF418Q8TF45 676 aaPredicted RBP17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 CORO2AQ92828 525 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 TNFRSF14Q92956 283 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 PLEKHJ1Q9NW61 149 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 TAS2R3Q9NYW6 316 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 CLPXO76031 633 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 RBP4P02753 201 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 IGHV1-8P0DP01 117 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 COX7A1P24310 79 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 RBMS3Q6XE24 437 aaKnown RBP17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 PRIMA1Q86XR5 153 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 OR13A1Q8NGR1 328 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 MRGPRDQ8TDS7 321 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 CCDC107Q8WV48 283 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 FBLN5Q9UBX5 448 aa17.03■□□□□ 0.32
SMARCB1-202ENST00000344921 TRAV39A0A0B4J263 110 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 GLAP06280 429 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 UBE2E1P51965 193 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 PAX5Q02548 391 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 IDNKQ5T6J7 187 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 GPR107Q5VW38 600 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 C6orf201Q7Z4U5 140 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 SUCNR1Q9BXA5 334 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 NCOR1P1Q9H4R4 102 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 SOX21Q9Y651 276 aaPredicted RBP17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 JMJD1CQ15652 2540 aa17.02■□□□□ 0.32
SMARCB1-202ENST00000344921 A0A0A6YYD4 124 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 ZNF729A6NN14 1252 aaPredicted RBP17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 LDLRAD4O15165 306 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 SOCS1O15524 211 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 TCF21O43680 179 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 OMGP23515 440 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 CDK2P24941 298 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 CHATP28329 748 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 ALDH3B2P48448 385 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 VBP1P61758 197 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 PLA2G7Q13093 441 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 ZNF497Q6ZNH5 498 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 PNKDQ8N490 385 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 OR56B1Q8NGI3 324 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 DYRK2Q92630 601 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 FAAP24Q9BTP7 215 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 TRAPPC2LQ9UL33 140 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 NCS1P62166 190 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 FAM189A2Q15884 450 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 PRAMEF5Q5TYX0 476 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 C9orf139Q6ZV77 190 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 ANKRD13BQ86YJ7 626 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 FAM89BQ8N5H3 189 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 OR13D1Q8NGV5 346 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 OR4K15Q8NH41 348 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 SULT4A1Q9BR01 284 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 FAM96BQ9Y3D0 163 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 SESN1Q9Y6P5 492 aa17.01■□□□□ 0.31
SMARCB1-202ENST00000344921 KBTBD11-OT1A0A1B0GTJ5 212 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 MEIOCA2RUB1 952 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 METTL21EPA6NDL7 271 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 NPFFO15130 113 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 CA11O75493 328 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 MT-ND4P03905 459 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 SNRPBP14678 240 aaKnown RBP17■□□□□ 0.31
SMARCB1-202ENST00000344921 RAB6AP20340 208 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 RPS19P39019 145 aaKnown RBP17■□□□□ 0.31
SMARCB1-202ENST00000344921 SERPINB10P48595 397 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 EFNB2P52799 333 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 HEPN1Q6WQI6 88 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 Q6ZTK2 550 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 SIGLECL1Q8N7X8 197 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 NAA50Q9GZZ1 169 aaKnown RBP17■□□□□ 0.31
SMARCB1-202ENST00000344921 CALYQ9NYX4 217 aa17■□□□□ 0.31
SMARCB1-202ENST00000344921 MMP23AO75900 390 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 GZMHP20718 246 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 LGALS4P56470 323 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 C17orf58Q2M2W7 97 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 OR52W1Q6IF63 320 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 HCP5Q6MZN7 132 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 CROCCP3Q8IVE0 287 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 PIP4P2Q8N4L2 257 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 ZDHHC16Q969W1 377 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 CYYR1Q96J86 154 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 ATG5Q9H1Y0 275 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 PAHP00439 452 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 IL1AP01583 271 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 NFYBP25208 207 aa16.99■□□□□ 0.31
SMARCB1-202ENST00000344921 RPL5P46777 297 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms