RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HLA-DRB5Q30154 266 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 ELP2Q6IA86 826 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 DHRSXQ8N5I4 330 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 ZFP41Q8N8Y5 198 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 SETD9Q8NE22 299 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 OR13A1Q8NGR1 328 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 OR13C5Q8NGS8 318 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 OR9G1Q8NH87 305 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 MRGPRDQ8TDS7 321 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 NEK7Q8TDX7 302 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 TOMM40LQ969M1 308 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 PHF21AQ96BD5 680 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 ORAI1Q96D31 301 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 TMEM80Q96HE8 168 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 RCC1LQ96I51 464 aaKnown RBP9.93□□□□□ -0.82
SGCA-202ENST00000344627 TMEM138Q9NPI0 162 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 BABAM2Q9NXR7 383 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 IDI2-AS1Q9NZ38 188 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 CKLFQ9UBR5 152 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 CLEC2DQ9UHP7 191 aa9.93□□□□□ -0.82
SGCA-202ENST00000344627 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
SGCA-202ENST00000344627 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
SGCA-202ENST00000344627 SIRT4Q9Y6E7 314 aaPredicted RBP9.93□□□□□ -0.82
SGCA-202ENST00000344627 PNMA8CA0A1B0GUJ8 204 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 SH2D7A6NKC9 451 aaPredicted RBP9.92□□□□□ -0.82
SGCA-202ENST00000344627 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 OGG1O15527 345 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 FAM106CPP0CH98 169 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 SLC6A1P30531 599 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 HES1Q14469 280 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 KHDC1LQ5JSQ8 128 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 UTF1Q5T230 341 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 ATAD3CQ5T2N8 411 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 ZNF529Q6P280 563 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 OSR2Q8N2R0 312 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 SUMF2Q8NBJ7 301 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 OR4X2Q8NGF9 303 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 OR10X1Q8NGY0 326 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 OR52N1Q8NH53 320 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 GHSRQ92847 366 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 SMIM19Q96E16 107 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 KIRREL1Q96J84 757 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
SGCA-202ENST00000344627 OCSTAMPQ9BR26 566 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 DPCDQ9BVM2 203 aaPredicted RBP9.92□□□□□ -0.82
SGCA-202ENST00000344627 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.92□□□□□ -0.82
SGCA-202ENST00000344627 PCDHB16Q9NRJ7 776 aa9.92□□□□□ -0.82
SGCA-202ENST00000344627 PAK1IP1Q9NWT1 392 aaPredicted RBP9.92□□□□□ -0.82
SGCA-202ENST00000344627 AURKAIP1Q9NWT8 199 aaPredicted RBP9.92□□□□□ -0.82
SGCA-202ENST00000344627 DIMT1Q9UNQ2 313 aaKnown RBP9.92□□□□□ -0.82
SGCA-202ENST00000344627 A0A1W2PPK0 400 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 TCRBV4S1A1TA0A5B7 111 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 J3QR06 171 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 OR2F2O95006 317 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 IL1AP01583 271 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 PRB2P02812 416 aaPredicted RBP9.91□□□□□ -0.82
SGCA-202ENST00000344627 PF4V1P10720 104 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 KCNJ3P48549 501 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 RIPK1Q13546 671 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 RCN1Q15293 331 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 SLC22A6Q4U2R8 563 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 RSBN1Q5VWQ0 802 aaPredicted RBP9.91□□□□□ -0.82
SGCA-202ENST00000344627 PLPPR1Q8TBJ4 325 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 CCDC107Q8WV48 283 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 ZNF184Q99676 751 aaPredicted RBP9.91□□□□□ -0.82
SGCA-202ENST00000344627 ZNF581Q9P0T4 197 aa9.91□□□□□ -0.82
SGCA-202ENST00000344627 A0A087X0M5 115 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 A0A1B0GX30 115 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 A0A1W2PPE3 182 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 TMEM30CPA0ZSE6 113 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 ADARB2-AS1A8MUL3 147 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 LY6LH3BQJ8 138 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 GEMIN2O14893 280 aaKnown RBP9.9□□□□□ -0.82
SGCA-202ENST00000344627 LALBAP00709 142 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 PF4P02776 101 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 SSTR5P35346 364 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 RBM11P57052 281 aaKnown RBP9.9□□□□□ -0.82
SGCA-202ENST00000344627 ST3GAL4Q11206 333 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 MADCAM1Q13477 382 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 HNF4GQ14541 408 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 VAX1Q5SQQ9 334 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 FOXB2Q5VYV0 432 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 ASCL4Q6XD76 172 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 STX19Q8N4C7 294 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 JAGN1Q8N5M9 183 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 OR56B4Q8NH76 319 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 UBALD1Q8TB05 177 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 DPF1Q92782 380 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 GGHQ92820 318 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
SGCA-202ENST00000344627 NCOR1P1Q9H4R4 102 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 C8orf4Q9NR00 106 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 PSG11Q9UQ72 335 aa9.9□□□□□ -0.82
SGCA-202ENST00000344627 A0A1W2PP11 408 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 EFCAB10A6NFE3 127 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 SNRNP70P08621 437 aaKnown RBP9.89□□□□□ -0.83
SGCA-202ENST00000344627 CGB3P0DN86 165 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 CGB7P0DN87 165 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms