RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CALHM2Q9HA72 323 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 TUBG2Q9NRH3 451 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 CEP250Q9BV73 2442 aa10.29□□□□□ -0.76
RTN3-203ENST00000341307 SPTBN2O15020 2390 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 FER1L5A0AVI2 2057 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 SPTBN4Q9H254 2564 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 IGHV3-20A0A0C4DH32 117 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 LOC102723971A0A1B0GUV8 181 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 DCDC2BA2VCK2 349 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 BLACEA4D250 179 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 E5RGE8 158 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 TIAF1O95411 115 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 SYNGR4O95473 234 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 ASCL1P50553 236 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 ZNF41P51814 821 aaPredicted RBP10.28□□□□□ -0.76
RTN3-203ENST00000341307 NSDHLQ15738 373 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 CST9LP1Q5W188 147 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 VWA1Q6PCB0 445 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 WFDC8Q8IUA0 241 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 SLC38A9Q8NBW4 561 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 BCL2L2Q92843 193 aaPredicted RBP10.28□□□□□ -0.76
RTN3-203ENST00000341307 ZNF501Q96CX3 271 aaPredicted RBP10.28□□□□□ -0.76
RTN3-203ENST00000341307 TSSK2Q96PF2 358 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 RTN4RQ9BZR6 473 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 CHRNA10Q9GZZ6 450 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 TMEM9BQ9NQ34 198 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 TAS2R4Q9NYW5 299 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 NSG2Q9Y328 171 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 SERINC4A6NH21 518 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 VSTM2BA6NLU5 285 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 XRCC2O43543 280 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 DDAH2O95865 285 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 CFIP05156 583 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 JMJD7P0C870 316 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 FBLP22087 321 aaKnown RBP10.28□□□□□ -0.76
RTN3-203ENST00000341307 ATP6V0CP27449 155 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 CTRLP40313 264 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
RTN3-203ENST00000341307 C1QL3Q5VWW1 255 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 MYPOPQ86VE0 399 aaPredicted RBP10.28□□□□□ -0.76
RTN3-203ENST00000341307 OR5L1Q8NGL2 311 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 VN1R17PQ8TDU5 208 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 PPP1R14AQ96A00 147 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 PTX4Q96A99 478 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 APH1AQ96BI3 265 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 CYYR1Q96J86 154 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 RHBDD3Q9Y3P4 386 aa10.28□□□□□ -0.76
RTN3-203ENST00000341307 IGKV3D-11A0A0A0MRZ8 115 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 AQP7P3A6NL99 342 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 NPIPA2E9PIF3 369 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 WDR1O75083 606 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 NDUFB2O95178 105 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 EPHA8P29322 1005 aaPredicted RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 PTGER4P35408 488 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 MPLP40238 635 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 CLDN18P56856 261 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 HLA-BQ31612 363 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 CDC20BQ86Y33 519 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 TMEM123Q8N131 208 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 OR4D6Q8NGJ1 314 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 FNDC9Q8TBE3 224 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 ZNF721Q8TF20 911 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 MRPL24Q96A35 216 aaKnown RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 PILRBQ9UKJ0 227 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 ADAMTS9Q9P2N4 1935 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 CACNA1CQ13936 2221 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 LY6G6EA0A0G2JKS1 128 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 FIGNL2A6NMB9 653 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 IGFBP3P17936 291 aaPredicted RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 UBE2NP61088 152 aaKnown RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 RHOGP84095 191 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 TRIM61Q5EBN2 209 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 VAX1Q5SQQ9 334 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 WDR74Q6RFH5 385 aaPredicted RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 OR13G1Q8NGZ3 307 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 DYRK2Q92630 601 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 PINX1Q96BK5 328 aaKnown RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 OR6C1Q96RD1 312 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 VN1R1Q9GZP7 353 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 ZNF703Q9H7S9 590 aaPredicted RBP10.27□□□□□ -0.77
RTN3-203ENST00000341307 SLC22A13Q9Y226 551 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 U3KQA8 63 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 CACNA1EQ15878 2313 aa10.27□□□□□ -0.77
RTN3-203ENST00000341307 ADAMTS20P59510 1910 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 A0A1B0GX78 115 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 MAP1LC3B2A6NCE7 125 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 IGKV3-11P04433 115 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 PSG1P11464 419 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 TCN2P20062 427 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 RPS20P60866 119 aaKnown RBP10.26□□□□□ -0.77
RTN3-203ENST00000341307 CCL7P80098 99 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 UNC119Q13432 240 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 C16orf47Q6ZP98 133 aaPredicted RBP10.26□□□□□ -0.77
RTN3-203ENST00000341307 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
RTN3-203ENST00000341307 REPIN1Q9BWE0 567 aaKnown RBP10.26□□□□□ -0.77
RTN3-203ENST00000341307 MAP1LC3BQ9GZQ8 125 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms