RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RBKSQ9H477 322 aa11.43□□□□□ -0.58
USP47-202ENST00000339865 GFYI3L273 518 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 KBTBD11O94819 623 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 F12P00748 615 aaPredicted RBP11.42□□□□□ -0.58
USP47-202ENST00000339865 SMIM13P0DJ93 91 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 TMUB1Q9BVT8 246 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 DDA1Q9BW61 102 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 ADGRB2O60241 1585 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 CHST1O43916 411 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 CXorf1O96002 111 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 UBALD2Q8IYN6 164 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 CSNK1DP48730 415 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 SCD5Q86SK9 330 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 TREM2Q9NZC2 230 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 AMMECR1Q9Y4X0 333 aaPredicted RBP11.42□□□□□ -0.58
USP47-202ENST00000339865 SFT2D2O95562 160 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 NPPBP16860 134 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 SLC25A30Q5SVS4 291 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 HTR3DQ70Z44 454 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 TDHQ8IZJ6 230 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 CGB1A6NKQ9 187 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 FAM3BP58499 235 aaPredicted RBP11.42□□□□□ -0.58
USP47-202ENST00000339865 CKS1BP61024 79 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 ROM1Q03395 351 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 COL19A1Q14993 1142 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 PRR13Q9NZ81 148 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 MBPP02686 304 aaPredicted RBP11.42□□□□□ -0.58
USP47-202ENST00000339865 EPHA8P29322 1005 aaPredicted RBP11.42□□□□□ -0.58
USP47-202ENST00000339865 HFEQ30201 348 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 C1orf220Q5T0J3 134 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 OR4C3Q8NH37 302 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 C8orf44Q96CB5 159 aa11.42□□□□□ -0.58
USP47-202ENST00000339865 WNK1Q9H4A3 2382 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 OR4A8P0C604 315 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 HKR1P10072 659 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 PMELP40967 661 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 CCSMST1Q4G0I0 132 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 Q8IYB0 196 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 SYS1Q8N2H4 156 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 LEPROTL1O95214 131 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 CTSSP25774 331 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 DDTP30046 118 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 MAS1LP35410 378 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 GVQW1Q8N7I0 195 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 PPM1DO15297 605 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 TMPRSS2O15393 492 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 GP1BAP07359 652 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 UBE2DNLQ8IWF7 75 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 LILRA3Q8N6C8 439 aaPredicted RBP11.41□□□□□ -0.58
USP47-202ENST00000339865 IGF2P01344 180 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 TYMSP04818 313 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 FCGR2BP31994 310 aaPredicted RBP11.41□□□□□ -0.58
USP47-202ENST00000339865 INSL4Q14641 139 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 PMCHL1Q16048 86 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
USP47-202ENST00000339865 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 A0A1W2PR48 441 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 TNFRSF1AP19438 455 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 MFAP4P55083 255 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 C10orf113Q5VZT2 155 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 OR2Y1Q8NGV0 311 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 CITED1Q99966 193 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 CD22P20273 847 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 GALNSP34059 522 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 SKP2Q13309 424 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 DHRS4L2Q6PKH6 230 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 STXBP6Q8NFX7 210 aa11.41□□□□□ -0.58
USP47-202ENST00000339865 HIST1H1DP16402 221 aaKnown RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 EMDP50402 254 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 WFIKKN1Q96NZ8 548 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 NEU1Q99519 415 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 HS3ST2Q9Y278 367 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 ZNF646O15015 1829 aaPredicted RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 ZNF865P0CJ78 1059 aaPredicted RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 HTN3P15516 51 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 ZNF83P51522 516 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 SLC37A2Q8TED4 501 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 APOBEC3DQ96AK3 386 aaPredicted RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 TMEM70Q9BUB7 260 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 MYOZ1Q9NP98 299 aaPredicted RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 DNAJB12Q9NXW2 375 aaKnown RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 TRGC2P03986 189 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 ERGP11308 486 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 HOXD9P28356 352 aaPredicted RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 Q7L0L9 218 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 RHNO1Q9BSD3 238 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 KCNE3Q9Y6H6 103 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 PTGESO14684 152 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 TGFAP01135 160 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
USP47-202ENST00000339865 FTH1P19P0C7X4 201 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 Q8WTZ3 238 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 CBLN4Q9NTU7 201 aa11.4□□□□□ -0.58
USP47-202ENST00000339865 hADV38S2A0JD32 116 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms