RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP1-201ENST00000339269 SMIM8Q96KF7 97 aa11.04□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
CDK5RAP1-201ENST00000339269 IFT22Q9H7X7 185 aa11.04□□□□□ -0.64
CDK5RAP1-201ENST00000339269 DUX4Q9UBX2 424 aa11.04□□□□□ -0.64
CDK5RAP1-201ENST00000339269 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 PKD1L2Q7Z442 2459 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 J3QT63 122 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 LPAR6P43657 344 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 CCL11P51671 97 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ARHGDIBP52566 201 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TMEM33P57088 247 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ZNF273Q14593 569 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 PXDC1Q5TGL8 231 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 UQCC3Q6UW78 93 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 CLEC9AQ6UXN8 241 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 LINC00596Q86U02 117 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ZNF573Q86YE8 665 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 LGI3Q8N145 548 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TMEM56Q96MV1 263 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 RCL1Q9Y2P8 373 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ATP23Q9Y6H3 246 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TMEM56-RWDD3S4R434 201 aa11.03□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ESPL1Q14674 2120 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 C3orf85A0A1B0GTC6 90 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 DNASE2O00115 360 aaPredicted RBP11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 ABCD4O14678 606 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TAAR5O14804 337 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 BET1O15155 118 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 SCGB1D2O95969 90 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 GABRA6Q16445 453 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 TBC1D26Q86UD7 250 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 FAM58AQ8N1B3 248 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 GAPTQ8N292 157 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 OR5T2Q8NGG2 359 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 OR2J1Q9GZK6 312 aa11.02□□□□□ -0.64
CDK5RAP1-201ENST00000339269 CACNA1GO43497 2377 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TMEM218A2RU14 115 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 NKX2-6A6NCS4 301 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 LYZL6O75951 148 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TSPAN9O75954 239 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 APOC3P02656 99 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 KIR2DL2P43627 348 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 IDH3GP51553 393 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 AKR1C2P52895 323 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PPP1CBP62140 327 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 AKR1C1Q04828 323 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 C10orf91Q5T1B1 145 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZNF324BQ6AW86 544 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZNF600Q6ZNG1 722 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SELENOHQ8IZQ5 122 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CCDC71LQ8N9Z2 235 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 WDR31Q8NA23 367 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 C9orf106Q8NAJ2 232 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PLPPR1Q8TBJ4 325 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SECTM1Q8WVN6 248 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 RDH5Q92781 318 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 HIST1H2AAQ96QV6 131 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CABLES2Q9BTV7 478 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SMIM3Q9BZL3 60 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PLK3Q9H4B4 646 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PRRC2CQ9Y520 2896 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 E5RGE8 158 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TRIM77I1YAP6 450 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 J3QW42 95 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 COX5AP20674 150 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 SULT1A2P50226 295 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TBC1D28Q2M2D7 210 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 MEX3BQ6ZN04 569 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 FAM214BQ7L5A3 538 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 FAM185AQ8N0U4 392 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 RBM14Q96PK6 669 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 MMP26Q9NRE1 261 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 CCL28Q9NRJ3 127 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 NSG2Q9Y328 171 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TMED3Q9Y3Q3 217 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 MGAQ8IWI9 3026 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 PRR14LQ5THK1 2151 aa11.01□□□□□ -0.65
CDK5RAP1-201ENST00000339269 FAM74A7A6NL05 159 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 ZNF705EA8MWA4 302 aaPredicted RBP11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 AQP7O14520 342 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 HS3ST1O14792 307 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 TK1P04183 234 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 GLAP06280 429 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 MPV17P39210 176 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 NMSQ5H8A3 153 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 VWA1Q6PCB0 445 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 BTNL8Q6UX41 500 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 Q6ZT83 130 aa11□□□□□ -0.65
CDK5RAP1-201ENST00000339269 P4HA3Q7Z4N8 544 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms