RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 MYCNOSP40205 109 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 SLC35B1P78383 322 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 MADCAM1Q13477 382 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 Q6P435 159 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 C18orf65Q6ZTR6 163 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 SAXO1Q8IYX7 474 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 SYS1Q8N2H4 156 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 DRAM1Q8N682 238 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 P2RX4Q99571 388 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 C9orf16Q9BUW7 83 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 ERVK13-1Q9NX77 482 aa12.35□□□□□ -0.43
LINC01116-202ENST00000339037 A0A1W2PPI3 338 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 J3QR06 171 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 HSPB6O14558 160 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 FGF16O43320 207 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 ZFPL1O95159 310 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 DGCR2P98153 550 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 CDK5R1Q15078 307 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 ZNF695Q8IW36 515 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 COMMD1Q8N668 190 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 ZNF565Q8N9K5 539 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 OR51T1Q8NGJ9 327 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 ZCCHC4Q9H5U6 513 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 CALYQ9NYX4 217 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
LINC01116-202ENST00000339037 ELOA3CA0A087WX78 387 aaPredicted RBP12.33□□□□□ -0.44
LINC01116-202ENST00000339037 MEIKINA0A087WXM9 373 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 LOC100130705A0A1B0GUX0 176 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 H0YHG0 523 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 FADS2O95864 444 aaKnown RBP12.33□□□□□ -0.44
LINC01116-202ENST00000339037 IL1AP01583 271 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 TMEM225BP0DP42 221 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 RAB7AP51149 207 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 RAB25P57735 213 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 HNF4GQ14541 408 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 LCE2CQ5TA81 110 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 SLC35E3Q7Z769 313 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 OR8H3Q8N146 312 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 PQLC1Q8N2U9 271 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 OR52I1Q8NGK6 324 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 OR13A1Q8NGR1 328 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 HAVCR2Q8TDQ0 301 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 TFAP2CQ92754 450 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 LEAP2Q969E1 77 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 MRPL48Q96GC5 212 aaKnown RBP12.33□□□□□ -0.44
LINC01116-202ENST00000339037 Q96MT0 163 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 PDCD1LG2Q9BQ51 273 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 FAM118AQ9NWS6 357 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 KIF25Q9UIL4 384 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 PSG11Q9UQ72 335 aa12.33□□□□□ -0.44
LINC01116-202ENST00000339037 H0YJX3 145 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 SULT1B1O43704 296 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 MPZL2O60487 215 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 IGHG2P01859 326 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 HCKP08631 526 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
LINC01116-202ENST00000339037 CGB3P0DN86 165 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 CGB7P0DN87 165 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 C21orf33P30042 268 aaPredicted RBP12.32□□□□□ -0.44
LINC01116-202ENST00000339037 MTNR1BP49286 362 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 GP2P55259 537 aaKnown RBP12.32□□□□□ -0.44
LINC01116-202ENST00000339037 ZP1P60852 638 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 RAB40BQ12829 278 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 DIAPH2-AS1Q14236 149 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 KISS1Q15726 138 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
LINC01116-202ENST00000339037 LPCAT4Q643R3 524 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 PARP16Q8N5Y8 322 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 OR10X1Q8NGY0 326 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 RGP1Q92546 391 aaPredicted RBP12.32□□□□□ -0.44
LINC01116-202ENST00000339037 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 BARHL1Q9BZE3 327 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 IDI2-AS1Q9NZ38 188 aa12.32□□□□□ -0.44
LINC01116-202ENST00000339037 TMEM212A6NML5 194 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 CCL24O00175 119 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 RAMP3O60896 148 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 LIMS3P0CW19 117 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 LIMS4P0CW20 117 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 GNG10P50151 68 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 GTF2A1P52655 376 aaPredicted RBP12.31□□□□□ -0.44
LINC01116-202ENST00000339037 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
LINC01116-202ENST00000339037 LTC4SQ16873 150 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 TEX38Q6PEX7 206 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 SERPINA12Q8IW75 414 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 STPG2Q8N412 459 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 MRGPRDQ8TDS7 321 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 TSEN15Q8WW01 171 aaKnown RBP12.31□□□□□ -0.44
LINC01116-202ENST00000339037 RAX2Q96IS3 184 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 NCOR1P1Q9H4R4 102 aa12.31□□□□□ -0.44
LINC01116-202ENST00000339037 MRPS18AQ9NVS2 196 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms