RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 IGKV1-27A0A075B6S5 117 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 IFI6P09912 130 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 FOSL1P15407 271 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 EGR1P18146 543 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF818PQ6ZRF7 136 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 CXorf67Q86X51 503 aaPredicted RBP12.23□□□□□ -0.45
PCDH8-201ENST00000338862 OR10J5Q8NHC4 309 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 TMEM204Q9BSN7 226 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 OPA3Q9H6K4 179 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 STARD10Q9Y365 291 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 IGKV1-12A0A0C4DH73 117 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 IGKV1D-12P01611 117 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 DEFA4P12838 97 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 CCL4P13236 92 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 AGAP20933 346 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 NXPH1P58417 271 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 SLC23A3Q6PIS1 610 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 NOSIPQ9Y314 301 aaKnown RBP12.23□□□□□ -0.45
PCDH8-201ENST00000338862 SUMO3P55854 103 aaPredicted RBP12.23□□□□□ -0.45
PCDH8-201ENST00000338862 BAXQ07812 192 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF816Q0VGE8 651 aaPredicted RBP12.23□□□□□ -0.45
PCDH8-201ENST00000338862 KHDC3LQ587J8 217 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 SPSB1Q96BD6 273 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 KLF2Q9Y5W3 355 aaPredicted RBP12.23□□□□□ -0.45
PCDH8-201ENST00000338862 HS3ST3B1Q9Y662 390 aa12.23□□□□□ -0.45
PCDH8-201ENST00000338862 H7BYZ3 331 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 PSG2P11465 335 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 SYT13Q7L8C5 426 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 TMEM171Q8WVE6 324 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 EDARADDQ8WWZ3 215 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 BOD1Q96IK1 185 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 FRYQ5TBA9 3013 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 HBE1P02100 147 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 GRPP07492 148 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 CADP27708 2225 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 CLDN15P56746 228 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 PLGLB1Q02325 96 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 RTP5Q14D33 572 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF100Q8IYN0 542 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 GNPNAT1Q96EK6 184 aaPredicted RBP12.22□□□□□ -0.45
PCDH8-201ENST00000338862 ATG101Q9BSB4 218 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 MSL2Q9HCI7 577 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 OR5H1A6NKK0 313 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 PPP5D1E7EU14 171 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 PSG4Q00888 419 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 PLP2Q04941 152 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 RAB30Q15771 203 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 C3AR1Q16581 482 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 LINC00696Q6ZRV3 163 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 GLRX2Q9NS18 164 aa12.22□□□□□ -0.45
PCDH8-201ENST00000338862 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 TRDCB7Z8K6 153 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 CLDN34H7C241 214 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 SOD3P08294 240 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 CDX1P47902 265 aaPredicted RBP12.21□□□□□ -0.45
PCDH8-201ENST00000338862 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.45
PCDH8-201ENST00000338862 FGFBP3Q8TAT2 258 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 SRXN1Q9BYN0 137 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 VSIRQ9H7M9 311 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 PNRC2Q9NPJ4 139 aaKnown RBP12.21□□□□□ -0.45
PCDH8-201ENST00000338862 TINAGQ9UJW2 476 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 IGKV1D-13A0A0B4J2D9 117 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 LOC102725191A0A1B0GVB3 256 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 IGKV1-13P0DP09 117 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
PCDH8-201ENST00000338862 SELEP16581 610 aa12.21□□□□□ -0.46
PCDH8-201ENST00000338862 FUT6P51993 359 aa12.21□□□□□ -0.46
PCDH8-201ENST00000338862 HGFACQ04756 655 aa12.21□□□□□ -0.46
PCDH8-201ENST00000338862 C10orf91Q5T1B1 145 aa12.21□□□□□ -0.46
PCDH8-201ENST00000338862 NCR3LG1Q68D85 454 aa12.21□□□□□ -0.46
PCDH8-201ENST00000338862 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.46
PCDH8-201ENST00000338862 RPRMQ9NS64 109 aa12.21□□□□□ -0.46
PCDH8-201ENST00000338862 SEC14L6B5MCN3 397 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 LSM6P62312 80 aaKnown RBP12.2□□□□□ -0.46
PCDH8-201ENST00000338862 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
PCDH8-201ENST00000338862 LYPD6Q86Y78 171 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 FAM89BQ8N5H3 189 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 RFESDQ8TAC1 157 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 CPT1CQ8TCG5 803 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
PCDH8-201ENST00000338862 XKRY2A2RUG3 117 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 SPINK4O60575 86 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 CRYAAP02489 173 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 MPZP25189 248 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms