RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZNF850A8MQ14 1090 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 UMAD1C9J7I0 102 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 J3QW42 95 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 NUPL2O15504 423 aaKnown RBP9.25□□□□□ -0.93
RTN3-201ENST00000338850 ZG16O60844 167 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 PITX3O75364 302 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 TUSC2O75896 110 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 DIRAS3O95661 229 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 NAPSAO96009 420 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 IGKV1D-12P01611 117 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 MBPP02686 304 aaPredicted RBP9.25□□□□□ -0.93
RTN3-201ENST00000338850 OR5AC1P0C628 307 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 MAS1LP35410 378 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 SNCAP37840 140 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 KIR2DS4P43632 304 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 NPBWR1P48145 328 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 GFRA1P56159 465 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 HERV-K104P61576 105 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 BAXQ07812 192 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 ZNF266Q14584 549 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 KIR2DS1Q14954 304 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 TAF9Q16594 264 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 ABHD17BQ5VST6 288 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 GLYATL2Q8WU03 294 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 HPSE2Q8WWQ2 592 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 KIRREL1Q96J84 757 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 FAAP24Q9BTP7 215 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 LIME1Q9H400 295 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 IFT22Q9H7X7 185 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 SPACA1Q9HBV2 294 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 OR2S2Q9NQN1 319 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 GSKIPQ9P0R6 139 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 ABI3Q9P2A4 366 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 BOKQ9UMX3 212 aaPredicted RBP9.25□□□□□ -0.93
RTN3-201ENST00000338850 ZGRF1Q86YA3 2104 aa9.25□□□□□ -0.93
RTN3-201ENST00000338850 LRBAP50851 2863 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 IGHV3-15A0A0B4J1V0 119 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 ZNF724A8MTY0 619 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 NPIPB11E5RHQ5 1161 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 PPYP01298 95 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 FGF12P61328 243 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 RAB1AP62820 205 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 SRSF3P84103 164 aaKnown RBP9.24□□□□□ -0.93
RTN3-201ENST00000338850 RNPS1Q15287 305 aaKnown RBP9.24□□□□□ -0.93
RTN3-201ENST00000338850 RHEBQ15382 184 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 TSC22D1Q15714 1073 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 CEACAM16Q2WEN9 425 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 FAM76BQ5HYJ3 339 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 OR2A2Q6IF42 318 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 SLC22A25Q6T423 547 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 DPPA3Q6W0C5 159 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 FBXW12Q6X9E4 464 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 FAM219AQ8IW50 185 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 FBXL14Q8N1E6 418 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 OR10D3Q8NH80 312 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 OR14L1PQ8NHC6 308 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 MAFIPQ8WZ33 124 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 MALSU1Q96EH3 234 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 HDHD3Q9BSH5 251 aaPredicted RBP9.24□□□□□ -0.93
RTN3-201ENST00000338850 PBDC1Q9BVG4 233 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 REPIN1Q9BWE0 567 aaKnown RBP9.24□□□□□ -0.93
RTN3-201ENST00000338850 TMEM222Q9H0R3 208 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 HRH4Q9H3N8 390 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 CACFD1Q9UGQ2 172 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 ST3GAL6Q9Y274 331 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 CACNA1DQ01668 2161 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 CRYBG3Q68DQ2 2970 aa9.24□□□□□ -0.93
RTN3-201ENST00000338850 FAM230AA0A1W2PPH8 454 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 TRDCB7Z8K6 153 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 K7N7A8 449 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 GEMIN2O14893 280 aaKnown RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 SPRY1O43609 319 aaPredicted RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 TSPAN15O95858 294 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 CRYABP02511 175 aaKnown RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 B4GALT1P15291 398 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 RCC1P18754 421 aaPredicted RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 NME2P22392 152 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 UCP1P25874 307 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 ZNF92Q03936 586 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 GNMTQ14749 295 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 DAZAP2Q15038 168 aaPredicted RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 ACSF3Q4G176 576 aaPredicted RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 ACER2Q5QJU3 275 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 PLCXD3Q63HM9 321 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 GFRALQ6UXV0 394 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 OR2AE1Q8NHA4 323 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 ZNF837Q96EG3 531 aaPredicted RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 BOD1Q96IK1 185 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 SLC25A31Q9H0C2 315 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 UNKLQ9H9P5 680 aaKnown RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 Q9N2K0 584 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
RTN3-201ENST00000338850 LSM5Q9Y4Y9 91 aaKnown RBP9.23□□□□□ -0.93
RTN3-201ENST00000338850 MEX3AA1L020 520 aaKnown RBP9.22□□□□□ -0.93
RTN3-201ENST00000338850 COLCA2A8K830 154 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 ZNF732B4DXR9 585 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 MPPED1O15442 326 aa9.22□□□□□ -0.93
RTN3-201ENST00000338850 KCNAB3O43448 404 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms