RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 PDFQ9HBH1 243 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 HSPB8Q9UJY1 196 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 OVCH2Q7RTZ1 564 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 OR2W3Q7Z3T1 314 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 MUC20Q8N307 709 aaPredicted RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SGK494Q96LW2 274 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 TRAV1-2A0A0B4J238 106 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 LILRA5A6NI73 299 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 APCSP02743 223 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 PF4P02776 101 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 JUNBP17275 347 aaPredicted RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 PERPQ96FX8 193 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 HEXA-AS1Q9H8Q6 139 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SFT2D2O95562 160 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 DAOP14920 347 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SELENOPP49908 381 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 CCL8P80075 99 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 TMEM92Q6UXU6 159 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SH2D5Q6ZV89 423 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 OR4D9Q8NGE8 314 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 ZNF665Q9H7R5 613 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SLC25A10Q9UBX3 287 aaPredicted RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 TRDCB7Z8K6 153 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 PLPP3O14495 311 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SYNGR2O43760 224 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 DHRS2Q13268 280 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 EIF3IQ13347 325 aaKnown RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 COL13A1Q5TAT6 717 aaPredicted RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 KLK15Q9H2R5 256 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 CLDN34H7C241 214 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 TNFSF14O43557 240 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 MPDU1O75352 247 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 PRSS2P07478 247 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 SMIM18P0DKX4 95 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
SHANK2-201ENST00000338508 PMELP40967 661 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 GZMKP49863 264 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 VN1R17PQ8TDU5 208 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 MRGPRFQ96AM1 343 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 TMEM167BQ9NRX6 74 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
SHANK2-201ENST00000338508 PDCD6O75340 191 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 ZNF273Q14593 569 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 PIGYQ3MUY2 71 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 FAM131CQ96AQ9 280 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 SYT11Q9BT88 431 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 GPR61Q9BZJ8 451 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 TUBA4BQ9H853 241 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 LAMA4Q16363 1823 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 STAG3L2P0CL84 134 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 GLDNQ6ZMI3 551 aaPredicted RBP10.37□□□□□ -0.75
SHANK2-201ENST00000338508 CLRN3Q8NCR9 226 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 OR10J6PQ8NGY7 276 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 BEX4Q9NWD9 120 aaPredicted RBP10.37□□□□□ -0.75
SHANK2-201ENST00000338508 CTSVO60911 334 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 WDR73Q6P4I2 378 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 RNF7Q9UBF6 113 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 ADAP1O75689 374 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 CDKN2AP42771 156 aaKnown RBP10.37□□□□□ -0.75
SHANK2-201ENST00000338508 SLC25A40Q8TBP6 338 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 DCTN5Q9BTE1 182 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 FUT9Q9Y231 359 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 COL16A1Q07092 1604 aaPredicted RBP10.37□□□□□ -0.75
SHANK2-201ENST00000338508 IGHV1OR21-1A0A087WYE8 117 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 A1L4Q6 167 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 ASCL5Q7RTU5 278 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 ARRDC1Q8N5I2 433 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 STXBP6Q8NFX7 210 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 NAT8Q9UHE5 227 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 ZDHHC8Q9ULC8 765 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
SHANK2-201ENST00000338508 ZNF815PA8K554 130 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 PATE3B3GLJ2 98 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 SMPD2O60906 423 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 TRA2AQ13595 282 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHANK2-201ENST00000338508 FAHD1Q6P587 224 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 VSTM2AQ8TAG5 236 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 SCN11AQ9UI33 1791 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 DUXBA0A1W2PPF3 345 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 HOXC4P09017 264 aaPredicted RBP10.36□□□□□ -0.75
SHANK2-201ENST00000338508 HTN3P15516 51 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 EMP1P54849 157 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 PRICKLE4Q2TBC4 344 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 SLC25A53Q5H9E4 307 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 PTOV1Q86YD1 416 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 BPIFA4PQ86YQ2 179 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 TPRX1Q8N7U7 411 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 NTMQ9P121 344 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 HEATR5BQ9P2D3 2071 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 SLX4Q8IY92 1834 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 GAPTQ8N292 157 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 PSMB11A5LHX3 300 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
SHANK2-201ENST00000338508 TMEM255AQ5JRV8 349 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms