RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 A0A0A6YYH2 397 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 A6NJ64 397 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 RBP4P02753 201 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 MT-ND4P03905 459 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 ZNF728P0DKX0 622 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 MMP9P14780 707 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 MZT2AQ6P582 158 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 ZNF497Q6ZNH5 498 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 C6orf201Q7Z4U5 140 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 NANPQ8TBE9 248 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 UPRTQ96BW1 309 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 ZNF714Q96N38 554 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 FAAP24Q9BTP7 215 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 SIRPDQ9H106 197 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 ABCG5Q9H222 651 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 GAL3ST2Q9H3Q3 398 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 METTL8Q9H825 291 aaKnown RBP12.65□□□□□ -0.38
SEC13-201ENST00000337354 UNKLQ9H9P5 680 aaKnown RBP12.65□□□□□ -0.38
SEC13-201ENST00000337354 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 CDC42EP3Q9UKI2 254 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.64□□□□□ -0.399e-8■■□□□ 13.1
SEC13-201ENST00000337354 FN1P02751 2386 aaKnown RBP12.64□□□□□ -0.39
SEC13-201ENST00000337354 UBE2QL1A1L167 161 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 C17orf98A8MV24 154 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 AVPP01185 164 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 PRTN3P24158 256 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 ZNF273Q14593 569 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 TRAPPC6BQ86SZ2 158 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 C11orf42Q8N5U0 333 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 OR5H6Q8NGV6 325 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 DYNC2LI1Q8TCX1 351 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 DGCR14Q96DF8 476 aaKnown RBP12.64□□□□□ -0.39
SEC13-201ENST00000337354 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
SEC13-201ENST00000337354 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 SULT4A1Q9BR01 284 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 DIABLOQ9NR28 239 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 ING3Q9NXR8 418 aa12.64□□□□□ -0.39
SEC13-201ENST00000337354 SETD2Q9BYW2 2564 aaPredicted RBP12.64□□□□□ -0.39
SEC13-201ENST00000337354 ZNF729A6NN14 1252 aaPredicted RBP12.63□□□□□ -0.39
SEC13-201ENST00000337354 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 BPIFB3P59826 476 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 PLAC9Q5JTB6 97 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 C1orf229Q6ZS94 237 aaPredicted RBP12.63□□□□□ -0.39
SEC13-201ENST00000337354 ZNF554Q86TJ5 538 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 Q8N7P7 452 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 PCGF1Q9BSM1 259 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 BEX2Q9BXY8 128 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 PECRQ9BY49 303 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEC13-201ENST00000337354 CCDC59Q9P031 241 aaKnown RBP12.63□□□□□ -0.39
SEC13-201ENST00000337354 TRAPPC2LQ9UL33 140 aa12.63□□□□□ -0.39
SEC13-201ENST00000337354 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
SEC13-201ENST00000337354 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 ORC5O43913 435 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 CGB3P0DN86 165 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 CGB7P0DN87 165 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 HIST1H1DP16402 221 aaKnown RBP12.62□□□□□ -0.39
SEC13-201ENST00000337354 CCL3L1P16619 93 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
SEC13-201ENST00000337354 DLX6P56179 175 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 MOGAT2Q3SYC2 334 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 UBE2NLQ5JXB2 153 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 NCR3LG1Q68D85 454 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 TRAT1Q6PIZ9 186 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 TCF23Q7RTU1 214 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 SLC25A38Q96DW6 304 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 TBX15Q96SF7 602 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 HEXA-AS1Q9H8Q6 139 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 LINC00574Q9H8X3 128 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 RAB9BQ9NP90 201 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 COMMD3Q9UBI1 195 aa12.62□□□□□ -0.39
SEC13-201ENST00000337354 TRBV6-6A0A0A6YYG2 114 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 DPPA5A6NC42 116 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 MFNGO00587 321 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 APOA1P02647 267 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 ERVFRD-1P60508 538 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 MRPS15P82914 257 aaKnown RBP12.61□□□□□ -0.39
SEC13-201ENST00000337354 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 SCGB2A2Q13296 93 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 CHRFAM7AQ494W8 412 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 C6orf183Q5T699 404 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 OR52W1Q6IF63 320 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 HEPN1Q6WQI6 88 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 VMO1Q7Z5L0 202 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 OR10A7Q8NGE5 316 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 OR13A1Q8NGR1 328 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 DYRK2Q92630 601 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 MBNL3Q9NUK0 354 aaKnown RBP12.61□□□□□ -0.39
SEC13-201ENST00000337354 AK3Q9UIJ7 227 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
SEC13-201ENST00000337354 NPIPB11E5RHQ5 1161 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 XRCC3O43542 346 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 CRLF1O75462 422 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 NAPSAO96009 420 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 FSHBP01225 129 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 GSTP1P09211 210 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms