RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C1orf100Q5SVJ3 147 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 KLF15Q9UIH9 416 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 SYNGR4O95473 234 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 CER1O95813 267 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 IL11P20809 199 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 USF1P22415 310 aaPredicted RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 MDH2P40926 338 aaKnown RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 NUFIP2Q7Z417 695 aaKnown RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 ADPRHL1Q8NDY3 354 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 MUCL1Q96DR8 90 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 MYOZ1Q9NP98 299 aaPredicted RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 SNURFLB1AK76 121 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 SIRPB1O00241 398 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 ZFAND5O76080 213 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 FGF5P12034 268 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 B4GALT1P15291 398 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 ERVFRD-1P60508 538 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 KIAA0895LQ68EN5 471 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 ZNF738Q8NE65 137 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 OR4X1Q8NH49 305 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 C8orf44Q96CB5 159 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 OBP2AQ9NY56 170 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 GNG12Q9UBI6 72 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 TRAV39A0A0B4J263 110 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 OR5G3P0C626 314 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 VDAC1P21796 283 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 CEBPEQ15744 281 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 MRPL54Q6P161 138 aaKnown RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 PTX4Q96A99 478 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 MARS2Q96GW9 593 aaKnown RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 AICDAQ9GZX7 198 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 TMEM74BQ9NUR3 256 aa11.6□□□□□ -0.55
COL2A1-201ENST00000337299 KLF2Q9Y5W3 355 aaPredicted RBP11.6□□□□□ -0.55
COL2A1-201ENST00000337299 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 MYF5P13349 255 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
COL2A1-201ENST00000337299 C1orf53Q5VUE5 145 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 SYT13Q7L8C5 426 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 PTPMT1Q8WUK0 201 aaPredicted RBP11.59□□□□□ -0.55
COL2A1-201ENST00000337299 EDARADDQ8WWZ3 215 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 C22orf15Q8WYQ4 148 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
COL2A1-201ENST00000337299 FGF21Q9NSA1 209 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 P4HTMQ9NXG6 502 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 E9PQ18 207 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 DEGS1O15121 323 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 DHRS3O75911 302 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 HRASP01112 189 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 SELLP14151 372 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 Q56UQ5 140 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 TMEM164Q5U3C3 297 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 CDCP2Q5VXM1 449 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 TIMP4Q99727 224 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 WASHC3Q9Y3C0 194 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 SYNGR2O43760 224 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 FSTP19883 344 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 DRD3P35462 400 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 P2RY6Q15077 328 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 RSPO4Q2I0M5 234 aaPredicted RBP11.59□□□□□ -0.55
COL2A1-201ENST00000337299 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 NOXO1Q8NFA2 376 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 CPT1CQ8TCG5 803 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 MRPL37Q9BZE1 423 aaKnown RBP11.59□□□□□ -0.55
COL2A1-201ENST00000337299 SLC7A10Q9NS82 523 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 RARRES3Q9UL19 164 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
COL2A1-201ENST00000337299 C2CD4DB7Z1M9 353 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 BCAT2O15382 392 aaPredicted RBP11.58□□□□□ -0.56
COL2A1-201ENST00000337299 YPEL5P62699 121 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
COL2A1-201ENST00000337299 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 RBKSQ9H477 322 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 ANKRD36A6QL64 1941 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 LRRC3CA6NJW4 275 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 NXPH2O95156 264 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 CDC34P49427 236 aaPredicted RBP11.58□□□□□ -0.56
COL2A1-201ENST00000337299 CAMPP49913 170 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 TMEM50BP56557 158 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 SPATA45Q537H7 98 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 PRAMEF5Q5TYX0 476 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 PRAMEF6Q5VXH4 476 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 MMACHCQ9Y4U1 282 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 HS3ST3B1Q9Y662 390 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 IGKV1D-42A0A075B6H8 117 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 FRG2CA6NGY1 282 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 FBLL1A6NHQ2 334 aaKnown RBP11.58□□□□□ -0.56
COL2A1-201ENST00000337299 PDCD6O75340 191 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 CDS2O95674 445 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 P04436 131 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 CD33P20138 364 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
COL2A1-201ENST00000337299 STUMQ69YW2 141 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms