RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 H3F3AP84243 136 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 FAM3AP98173 230 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR5I1Q13606 314 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 C10orf128Q5T292 105 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 LIAT1Q6ZQX7 453 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 CCDC71LQ8N9Z2 235 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZFP62Q8NB50 900 aaPredicted RBP14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 RNASE8Q8TDE3 154 aaKnown RBP14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 FRZBQ92765 325 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 RAB24Q969Q5 203 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 MAP1BP46821 2468 aaKnown RBP14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 TNFSF12O43508 249 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 CBR3O75828 277 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 PGA5P0DJD9 388 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 ALDH3B1P43353 468 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 MRPS34P82930 218 aaKnown RBP14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 RAB35Q15286 201 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 WIPI1Q5MNZ9 446 aaPredicted RBP14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 HIST2H3PS2Q5TEC6 136 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 P4HA3Q7Z4N8 544 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 SSC4DQ8WTU2 575 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 TMEM54Q969K7 222 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 PBDC1Q9BVG4 233 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 WNT16Q9UBV4 365 aa14.29□□□□□ -0.12
CDC42EP4-201ENST00000335793 DNAJC13O75165 2243 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 GJE1A6NN92 205 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 SIAH2O43255 324 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 GPR137BO60478 399 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 CST7O76096 145 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 GAPDHP04406 335 aaKnown RBP14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 CCL2P13500 99 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZNF92Q03936 586 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 TMEM187Q14656 261 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 CRIP3Q6Q6R5 217 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 LHFPL2Q6ZUX7 228 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 TMEM123Q8N131 208 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 FOXB1Q99853 325 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 A0A096LPE4 126 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 A0A1W2PPZ6 126 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR4A8P0C604 315 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 RPS18P62269 152 aaKnown RBP14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 SAPCD1Q5SSQ6 148 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 SLC35G3Q8N808 338 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 OR2G3Q8NGZ4 309 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 PARD6GQ9BYG4 376 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 RFNGQ9Y644 331 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 LOC102725191A0A1B0GVB3 256 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 CDRT15L2A8MXV6 281 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 SSSCA1O60232 199 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 CHATP28329 748 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 ERVFRD-1P60508 538 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 RHEBQ15382 184 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZIC4Q8N9L1 334 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 WFDC1Q9HC57 220 aa14.28□□□□□ -0.12
CDC42EP4-201ENST00000335793 B4E171 279 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 NKX2-1P43699 371 aaPredicted RBP14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 PSG4Q00888 419 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 EXT1Q16394 746 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 SOHLH1Q5JUK2 328 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 MRPL14Q6P1L8 145 aaKnown RBP14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 ZNF611Q8N823 705 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 AGBL5Q8NDL9 886 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 RARRES2Q99969 163 aa14.27□□□□□ -0.12
CDC42EP4-201ENST00000335793 DMDP11532 3685 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 IGKV1-12A0A0C4DH73 117 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 IGKV1D-12P01611 117 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 EPHA1P21709 976 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 NPBWR2P48146 333 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 MRPS11P82912 194 aaKnown RBP14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 CLEC12BQ2HXU8 276 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 SUMF2Q8NBJ7 301 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 NAT6Q93015 286 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 TUBD1Q9UJT1 453 aa14.27□□□□□ -0.13
CDC42EP4-201ENST00000335793 IGHV1-45A0A0A0MS14 117 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 NKX2-6A6NCS4 301 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 FOXI3A8MTJ6 420 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 HSD17B6O14756 317 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 PTBP3O95758 552 aaKnown RBP14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 GDF1P27539 372 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 SNCAP37840 140 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 FOLR3P41439 243 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 TDGF1P3P51864 188 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 HAGHQ16775 308 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 ANGPTL4Q9BY76 406 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 PDCD6O75340 191 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 TK1P04183 234 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 PPP1CCP36873 323 aaKnown RBP14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 RAC3P60763 192 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 SIT1Q9Y3P8 196 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 RBM7Q9Y580 266 aaKnown RBP14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 FUT3P21217 361 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 P2RY1P47900 373 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 FUT6P51993 359 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 HMGN3Q15651 99 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 ABHD3Q8WU67 409 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 C10orf35Q96D05 121 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 TP53RKQ96S44 253 aa14.26□□□□□ -0.13
CDC42EP4-201ENST00000335793 TMEM38BQ9NVV0 291 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms