RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 TMEM255AQ5JRV8 349 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 FAM27D1Q5T7N8 215 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF740Q8NDX6 193 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 OR10S1Q8NGN2 331 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 OR10AG1Q8NH19 301 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PRELID3AQ96N28 172 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TWSG1Q9GZX9 223 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SEC11BP0C7V7 166 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PCMT1P22061 227 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PSG5Q15238 335 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 KISS1Q15726 138 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MORN4Q8NDC4 146 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 LINC01387J3KSC0 135 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 KBTBD11O94819 623 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF841Q6ZN19 808 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TCF23Q7RTU1 214 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 DPH3P1Q9H4G8 78 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 IL19Q9UHD0 177 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 B9D1Q9UPM9 204 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TIMP1P01033 207 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SAPCD1Q5SSQ6 148 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 C10orf113Q5VZT2 155 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 FBXO46Q6PJ61 603 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 LINC00596Q86U02 117 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ZADH2Q8N4Q0 377 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 DERL1Q9BUN8 251 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SLC25A37Q9NYZ2 338 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SPRY1O43609 319 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ARSAP15289 507 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF273Q14593 569 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM179BQ7Z7N9 219 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 MRPL30Q8TCC3 161 aaKnown RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 FAM157CP0CG43 387 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 HOXD9P28356 352 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PRRX1P54821 245 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 KCNAB1Q14722 419 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PRSS8Q16651 343 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 TCTN3Q6NUS6 607 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF519Q8TB69 540 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 EMC6Q9BV81 110 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RNF186Q9NXI6 227 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 H0YIG0 161 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 H3BNC9 293 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PRKRAO75569 313 aaKnown RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RIPPLY2Q5TAB7 128 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RARRES2Q99969 163 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 AGRNO00468 2067 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 MED19A0JLT2 244 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 A1L4Q6 167 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 MEF2CQ06413 473 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RTP2Q5QGT7 225 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SH2D5Q6ZV89 423 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SCD5Q86SK9 330 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 LRRC75AQ8NAA5 344 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ZG16BQ96DA0 208 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PRR14Q9BWN1 585 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 KCNE5Q9UJ90 142 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 FRG2CA6NGY1 282 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PDCD6O75340 191 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 B3GALT4O96024 378 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 HOXB1P14653 301 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 MMP9P14780 707 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 HFEQ30201 348 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 FAM216AQ8WUB2 273 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RND1Q92730 232 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 MYOZ1Q9NP98 299 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 NTMQ9P121 344 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ERRFI1Q9UJM3 462 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ANKRD20A5PA0PJZ0 165 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 C19orf67A6NJJ6 358 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 LEPROTL1O95214 131 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 MGPP08493 103 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RAB9AP51151 201 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 GNG3P63215 75 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SFTPA2Q8IWL1 248 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SFTPA1Q8IWL2 248 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 C10orf35Q96D05 121 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 OR5AC2Q9NZP5 309 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 HS3ST3A1Q9Y663 406 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 KIAA1549Q9HCM3 1950 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PSME4Q14997 1843 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 BCORQ6W2J9 1755 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ZFPL1O95159 310 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 CRYAAP02489 173 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 HSPB1P04792 205 aaKnown RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ORM2P19652 201 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 NRAPQ86VF7 1730 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 CA1P00915 261 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-201ENST00000335551 FCGR3AP08637 254 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 CDKN3Q16667 212 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 PYCR3Q53H96 274 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 RHBDD2Q6NTF9 364 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 SLC36A1Q7Z2H8 476 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 OR10V1Q8NGI7 309 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 OR5A1Q8NGJ0 315 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 ZDHHC16Q969W1 377 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 NRIP2Q9BQI9 281 aa5.49□□□□□ -1.53
CSMD1-201ENST00000335551 TARM1B6A8C7 271 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 CDX4O14627 284 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms