RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 IL7P13232 177 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 DTYMKP23919 212 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 IFITM3Q01628 133 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 LRRC10Q5BKY1 277 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 ZNF880Q6PDB4 577 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 CLDND2Q8NHS1 167 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 NEIL1Q96FI4 390 aaPredicted RBP17.83■□□□□ 0.44
TPM1-204ENST00000334895 DCTN5Q9BTE1 182 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 PCDHB10Q9UN67 800 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 MALRD1Q5VYJ5 2156 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 IGKV1D-8A0A087WSZ0 117 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 IGHV4-61A0A0C4DH41 118 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 IGHV2-5P01817 119 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 NDUFB7P17568 137 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 ERP29P30040 261 aaKnown RBP17.82■□□□□ 0.44
TPM1-204ENST00000334895 GDNFP39905 211 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 P2RX3P56373 397 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 MRPS15P82914 257 aaKnown RBP17.82■□□□□ 0.44
TPM1-204ENST00000334895 GDPD3Q7L5L3 318 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 OR8B3Q8NGG8 313 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 CCDC107Q8WV48 283 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 SNAPC3Q92966 411 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 OR8B2Q96RD0 313 aa17.82■□□□□ 0.44
TPM1-204ENST00000334895 RIMS4Q9H426 269 aaPredicted RBP17.82■□□□□ 0.44
TPM1-204ENST00000334895 CHMP1AQ9HD42 196 aaPredicted RBP17.82■□□□□ 0.44
TPM1-204ENST00000334895 MAP1AP78559 2803 aaPredicted RBP17.82■□□□□ 0.44
TPM1-204ENST00000334895 DOCK11Q5JSL3 2073 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 RCC1P18754 421 aaPredicted RBP17.81■□□□□ 0.44
TPM1-204ENST00000334895 EDDM3BP56851 147 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 LMO4P61968 165 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 Q5PR19 223 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 NLRC3Q7RTR2 1065 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 C5orf24Q7Z6I8 188 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 ST6GALNAC5Q9BVH7 336 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 Q9N2K0 584 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 KIAA2026Q5HYC2 2103 aa17.81■□□□□ 0.44
TPM1-204ENST00000334895 MEIKINA0A087WXM9 373 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 A0A1W2PQ09 198 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 ODAMA1E959 279 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 MEX3AA1L020 520 aaKnown RBP17.8■□□□□ 0.44
TPM1-204ENST00000334895 UPK1BO75841 260 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 RBBP9O75884 186 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 CBX5P45973 191 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 WDR25Q64LD2 544 aaPredicted RBP17.8■□□□□ 0.44
TPM1-204ENST00000334895 OR52W1Q6IF63 320 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 TCF23Q7RTU1 214 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 HOGA1Q86XE5 327 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 ABCB10Q9NRK6 738 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 MBNL3Q9NUK0 354 aaKnown RBP17.8■□□□□ 0.44
TPM1-204ENST00000334895 AKAP9Q99996 3911 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 NAT1P18440 290 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 LYSMD2Q8IV50 215 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 OR13A1Q8NGR1 328 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 SETD6Q8TBK2 473 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 BORCS5Q969J3 196 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 IFT46Q9NQC8 304 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 C19orf12Q9NSK7 152 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 CLN8Q9UBY8 286 aa17.8■□□□□ 0.44
TPM1-204ENST00000334895 H7C1Q1 480 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 IL2RGP31785 369 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 RCVRNP35243 200 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 ACTBP60709 375 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 ACTG1P63261 375 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 SSBP1Q04837 148 aaKnown RBP17.79■□□□□ 0.44
TPM1-204ENST00000334895 TRIQKQ629K1 86 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 FOXC2Q99958 501 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 NCOR1P1Q9H4R4 102 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 TRAPPC2LQ9UL33 140 aa17.79■□□□□ 0.44
TPM1-204ENST00000334895 ABCA2Q9BZC7 2435 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 A0A096LNT2 108 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 PHF1O43189 567 aaPredicted RBP17.78■□□□□ 0.44
TPM1-204ENST00000334895 KLF9Q13886 244 aaPredicted RBP17.78■□□□□ 0.44
TPM1-204ENST00000334895 STEAP3Q658P3 488 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 PRSS57Q6UWY2 283 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 Q6ZS49 121 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 BEST4Q8NFU0 473 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 MRGPRDQ8TDS7 321 aa17.78■□□□□ 0.44
TPM1-204ENST00000334895 MED13LQ71F56 2210 aa17.77■□□□□ 0.44
TPM1-204ENST00000334895 ANKRD20A5PA0PJZ0 165 aa17.77■□□□□ 0.44
TPM1-204ENST00000334895 POM121CA8CG34 1229 aa17.77■□□□□ 0.44
TPM1-204ENST00000334895 SLC25A16P16260 332 aa17.77■□□□□ 0.44
TPM1-204ENST00000334895 SRSF7Q16629 238 aaKnown RBP eCLIP17.77■□□□□ 0.44
TPM1-204ENST00000334895 H1FXQ92522 213 aaKnown RBP17.77■□□□□ 0.44
TPM1-204ENST00000334895 OTOGQ6ZRI0 2925 aa17.77■□□□□ 0.43
TPM1-204ENST00000334895 FUOMA2VDF0 154 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 KIAA1324LA8MWY0 1029 aaPredicted RBP17.76■□□□□ 0.43
TPM1-204ENST00000334895 HLA-DMAP28067 261 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 NPY4RP50391 375 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 GNB2P62879 340 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 CR1LQ2VPA4 569 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 BTN2A1Q7KYR7 527 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 MOB1BQ7L9L4 216 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 SSBP3Q9BWW4 388 aaPredicted RBP17.76■□□□□ 0.43
TPM1-204ENST00000334895 ARHGAP32A7KAX9 2087 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 C22orf46C9J442 243 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 C12orf77C9JDV5 145 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 GPR37O15354 613 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 SCTP09683 121 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 CGB3P0DN86 165 aa17.76■□□□□ 0.43
TPM1-204ENST00000334895 CGB7P0DN87 165 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms