RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TMEM252Q8N6L7 170 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 GPR179Q6PRD1 2367 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 PRR14LQ5THK1 2151 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 IGKV1-6A0A0C4DH72 117 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 LNP1A1A4G5 178 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 GJE1A6NN92 205 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 H0YL77 283 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 HLA-HP01893 362 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 GDF1P27539 372 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF154Q13106 437 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 RNF212Q495C1 297 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 SOHLH1Q5JUK2 328 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 TMEM211Q6ICI0 200 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 P4HA3Q7Z4N8 544 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 SUMF2Q8NBJ7 301 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 ADGRG7Q96K78 797 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 SGCZQ96LD1 299 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 OR51B6Q9H340 312 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 STRAPQ9Y3F4 350 aaKnown RBP10.56□□□□□ -0.72
VPS33B-201ENST00000333371 SLC22A20A6NK97 555 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 PLA2G5P39877 138 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 RND3P61587 244 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 C20orf204Q6ZNR8 217 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 OR1J1Q8NGS3 322 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 OR2V1Q8NHB1 315 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 TAAR9Q96RI9 348 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 ZPBPQ9BS86 351 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 PRRG4Q9BZD6 226 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
VPS33B-201ENST00000333371 TRAV39A0A0B4J263 110 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 A0A0G2JRQ6 117 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 RPL36A-HNRNPH2H7BZ11 118 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 CLN5O75503 358 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 NGFP01138 241 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 CELA3AP09093 270 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 PRDX4Q13162 271 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 TIPARPQ7Z3E1 657 aaKnown RBP10.55□□□□□ -0.72
VPS33B-201ENST00000333371 PBDC1Q9BVG4 233 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 MTCH1Q9NZJ7 389 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 C5orf49A4QMS7 147 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 RBFOX3A6NFN3 312 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 SYNGR1O43759 233 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 OR2C1O95371 312 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 FABP1P07148 127 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 ARF1P84077 181 aaKnown RBP10.55□□□□□ -0.72
VPS33B-201ENST00000333371 SSPNQ14714 243 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 ABLIM2Q6H8Q1 611 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 SPINK14Q6IE38 97 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 DBX2Q6ZNG2 339 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 SIGLEC12Q96PQ1 595 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 Q9N2K0 584 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 USF3Q68DE3 2245 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
VPS33B-201ENST00000333371 CHST1O43916 411 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 LILRA1O75019 489 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 IGHV2-5P01817 119 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 RD3LP0DJH9 198 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 RAB5CP51148 216 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 VAMP2P63027 116 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 UBALD1Q8TB05 177 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 PLPPR1Q8TBJ4 325 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 LYRM2Q9NU23 88 aaPredicted RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 H3BQ15 152 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 HS3ST1O14792 307 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 YIF1AO95070 293 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 CDS2O95674 445 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 TK1P04183 234 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 S100A9P06702 114 aaKnown RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 C17orf78Q8N4C9 275 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 CYB561D1Q8N8Q1 229 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 C1QTNF5Q9BXJ0 243 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 HES7Q9BYE0 225 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF552Q9H707 407 aaPredicted RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 TUBA4BQ9H853 241 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 SPENQ96T58 3664 aaKnown RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 ZFHX4Q86UP3 3567 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 COL27A1Q8IZC6 1860 aaPredicted RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 TRBV23-1A0A0A0MS06 115 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF732B4DXR9 585 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 PITX3O75364 302 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 RHEBQ15382 184 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 RDH5Q92781 318 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 RAB39BQ96DA2 213 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 CALHM2Q9HA72 323 aa10.54□□□□□ -0.72
VPS33B-201ENST00000333371 SEBOXQ9HB31 216 aaPredicted RBP10.54□□□□□ -0.72
VPS33B-201ENST00000333371 ARGFXA6NJG6 315 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 NAPSAO96009 420 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 PCBD1P61457 104 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms