RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 MPPED1O15442 326 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 EFNA2O43921 213 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 NUBP1P53384 320 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 ZNF154Q13106 437 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 SLC25A26Q70HW3 274 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 ABHD14BQ96IU4 210 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 F5H5K5 113 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 JMJD7P0C870 316 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 SUMO3P55854 103 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 FBXW4P57775 412 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 C17orf67Q0P5P2 114 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 MPV17LQ2QL34 196 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 NKAIN1Q4KMZ8 207 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 BRICD5Q6PL45 260 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 H1FOOQ8IZA3 346 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 ZNF286AQ9HBT8 521 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 GPR173Q9NS66 373 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 LRFN1Q9P244 771 aa15.63■□□□□ 0.09
CLSTN3-202ENST00000331148 ETV2O00321 342 aaPredicted RBP15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 ADAM20O43506 726 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 SPRY1O43609 319 aaPredicted RBP15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 MTCP1P56278 107 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 P2RY6Q15077 328 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 RAB35Q15286 201 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 IL22RA1Q8N6P7 574 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 ADGRG7Q96K78 797 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 HIST1H2AAQ96QV6 131 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 ZNF665Q9H7R5 613 aa15.62■□□□□ 0.09
CLSTN3-202ENST00000331148 NCOR1O75376 2440 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 OPN1LWP04000 364 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 TK1P04183 234 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 CD55P08174 381 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 ZNF695Q8IW36 515 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 IFI44Q8TCB0 444 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 TMEM56Q96MV1 263 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 TMEM56-RWDD3S4R434 201 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 IGHV5-10-1A0A0J9YXX1 117 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 A0A1B0GX78 115 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 FBLP22087 321 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 ZNF787Q6DD87 383 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 P4HTMQ9NXG6 502 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 VAX2Q9UIW0 290 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 UBE2J1Q9Y385 318 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 PTRH2Q9Y3E5 179 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 BDP1A6H8Y1 2624 aa15.61■□□□□ 0.09
CLSTN3-202ENST00000331148 ZNF814B7Z6K7 855 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 SLC33A1O00400 549 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 MMP9P14780 707 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 DUSP3P51452 185 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 CLN3Q13286 438 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 HIST3H3Q16695 136 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 RSPO4Q2I0M5 234 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 Q6ZSR3 168 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 SELENOHQ8IZQ5 122 aaKnown RBP15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 ADPRHL1Q8NDY3 354 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 SIGLEC12Q96PQ1 595 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 PYGO2Q9BRQ0 406 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 ADAMTS20P59510 1910 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 PPYP01298 95 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 OR4A8P0C604 315 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 IL24Q13007 206 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 HNF4GQ14541 408 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 C1orf189Q5VU69 101 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 WDR25Q64LD2 544 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 THNSL2Q86YJ6 484 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 C10orf35Q96D05 121 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 LAMP3Q9UQV4 416 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 MYO15AQ9UKN7 3530 aa15.6■□□□□ 0.09
CLSTN3-202ENST00000331148 NXPH3O95157 252 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 PFN1P07737 140 aaKnown RBP15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 PDLIM4P50479 330 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 PIGYQ3MUY2 71 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 Q6ZPA2 131 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 TBC1D26Q86UD7 250 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 FAM185AQ8N0U4 392 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 PLPPR1Q8TBJ4 325 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 OR6C1Q96RD1 312 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 RAB4AP20338 218 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 ID3Q02535 119 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 PAX5Q02548 391 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 EXT1Q16394 746 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 C16orf82Q7Z2V1 217 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 GPR137CQ8N3F9 429 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 ACY3Q96HD9 319 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 CCDC74BQ96LY2 380 aa15.59■□□□□ 0.09
CLSTN3-202ENST00000331148 VPS13AQ96RL7 3174 aa15.58■□□□□ 0.09
CLSTN3-202ENST00000331148 IGKV1-27A0A075B6S5 117 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 A0A1W2PNR3 127 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 M0R143 59 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 TUBG1P23258 451 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 MPLP40238 635 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 RHBDD2Q6NTF9 364 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 LCN15Q6UWW0 184 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 TGIF2LYQ8IUE0 185 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 POC1BQ8TC44 478 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 SPSB1Q96BD6 273 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 R3HDM4Q96D70 268 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 P2RX4Q99571 388 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 ARRDC1-AS1Q9H2J1 176 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 RPRMQ9NS64 109 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms