RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 HLA-DRB3P79483 266 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 MRPL49Q13405 166 aaKnown RBP19.07■□□□□ 0.64
PNKP-201ENST00000322344 OR5D13Q8NGL4 314 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 GMPPAQ96IJ6 420 aaPredicted RBP19.07■□□□□ 0.64
PNKP-201ENST00000322344 RTL8AQ9BWD3 113 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 SLC25A31Q9H0C2 315 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 CCL28Q9NRJ3 127 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 OR8U9P0C7N5 309 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 MMP9P14780 707 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 VDAC1P21796 283 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 CA6P23280 308 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 CD80P33681 288 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 FLI1Q01543 452 aaPredicted RBP19.06■□□□□ 0.64
PNKP-201ENST00000322344 NHLH2Q02577 135 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 PCSK4Q6UW60 755 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 OR8U1Q8NH10 309 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 KIRREL1Q96J84 757 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 ZNF488Q96MN9 340 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 CABLES2Q9BTV7 478 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 GLRX2Q9NS18 164 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 DLL3Q9NYJ7 618 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 VPS13AQ96RL7 3174 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 FREM1Q5H8C1 2179 aa19.06■□□□□ 0.64
PNKP-201ENST00000322344 HSD17B6O14756 317 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 MDH2P40926 338 aaKnown RBP19.05■□□□□ 0.64
PNKP-201ENST00000322344 CAMLGP49069 296 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 UCP2P55851 309 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 HMGN3Q15651 99 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 C5orf24Q7Z6I8 188 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 Q8IYB0 196 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 LILRB1Q8NHL6 650 aaPredicted RBP19.05■□□□□ 0.64
PNKP-201ENST00000322344 WNT2BQ93097 391 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 ADAT1Q9BUB4 502 aaKnown RBP19.05■□□□□ 0.64
PNKP-201ENST00000322344 PLEKHF2Q9H8W4 249 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 R4GN57 208 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 HS3ST1O14792 307 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 AGPAT2O15120 278 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 ADAM20O43506 726 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 CD82P27701 267 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 NPBWR1P48145 328 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 ZNF266Q14584 549 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 NMSQ5H8A3 153 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 RNFT1Q5M7Z0 435 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 TMEM88Q6PEY1 159 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 MOB1BQ7L9L4 216 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 OR10J5Q8NHC4 309 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 RDH5Q92781 318 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 OR51B6Q9H340 312 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 CACFD1Q9UGQ2 172 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 OR2W1Q9Y3N9 320 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 KPTNQ9Y664 436 aa19.05■□□□□ 0.64
PNKP-201ENST00000322344 FRYLO94915 3013 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 H7C2Y5 167 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 DEGS1O15121 323 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 VAMP2P63027 116 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 TGFBR3Q03167 851 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 P4HA3Q7Z4N8 544 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 H1FOOQ8IZA3 346 aaPredicted RBP19.04■□□□□ 0.64
PNKP-201ENST00000322344 LYRM2Q9NU23 88 aaPredicted RBP19.04■□□□□ 0.64
PNKP-201ENST00000322344 TREM2Q9NZC2 230 aa19.04■□□□□ 0.64
PNKP-201ENST00000322344 SHANK1Q9Y566 2161 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 LRP5LA4QPB2 252 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 FAM157AC9JC47 383 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 NPIPB11E5RHQ5 1161 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 PITX3O75364 302 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 PGLYRP1O75594 196 aaPredicted RBP19.03■□□□□ 0.64
PNKP-201ENST00000322344 HEXAP06865 529 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 WNT2P09544 360 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 SNCAP37840 140 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 ID4P47928 161 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 PEA15Q15121 130 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 MIDNQ504T8 468 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 ATP1A1-AS1Q5TC04 95 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 ZNF324BQ6AW86 544 aaPredicted RBP19.03■□□□□ 0.64
PNKP-201ENST00000322344 C19orf12Q9NSK7 152 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 POLDIP2Q9Y2S7 368 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 ZNF14P17017 642 aaPredicted RBP19.03■□□□□ 0.64
PNKP-201ENST00000322344 POLR2GP62487 172 aaKnown RBP eCLIP19.03■□□□□ 0.64
PNKP-201ENST00000322344 HFEQ30201 348 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 C20orf204Q6ZNR8 217 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 CBLN2Q8IUK8 224 aa19.03■□□□□ 0.64
PNKP-201ENST00000322344 ARHGAP21Q5T5U3 1957 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 FAM24AA6NFZ4 105 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 TSPAN9O75954 239 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 F12P00748 615 aaPredicted RBP19.02■□□□□ 0.64
PNKP-201ENST00000322344 ZNF44P15621 663 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 ID3Q02535 119 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 ZNF616Q08AN1 781 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 SHEQ5VZ18 495 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 Q6P435 159 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 C17orf78Q8N4C9 275 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 SNIP1Q8TAD8 396 aaKnown RBP19.02■□□□□ 0.64
PNKP-201ENST00000322344 CDH20Q9HBT6 801 aa19.02■□□□□ 0.64
PNKP-201ENST00000322344 AHCTF1Q8WYP5 2266 aa19.02■□□□□ 0.63
PNKP-201ENST00000322344 IGSF23A1L1A6 192 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 RHBDL1O75783 438 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 PRH1P02810 166 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 F2RP25116 425 aa19.01■□□□□ 0.63
PNKP-201ENST00000322344 UBE2NP61088 152 aaKnown RBP19.01■□□□□ 0.63
PNKP-201ENST00000322344 SPATA46Q5T0L3 261 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms