RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR6C3Q9NZP0 311 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 ADH4P08319 380 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 TRGC1P0CF51 173 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 CD1CP29017 333 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 KIR2DS2P43631 304 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PNLIPRP2P54317 469 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 CLDN15P56746 228 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 EWSR1Q01844 656 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMC1A-201ENST00000322213 GABRA6Q16445 453 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PECRQ9BY49 303 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PRAMEF26H0Y7S4 382 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 NTSR1P30989 418 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 ZDHHC23Q8IYP9 409 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM208Q9BTX3 173 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 POLDIP2Q9Y2S7 368 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 LINC01553A4QN01 128 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 TSPO2Q5TGU0 170 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 RTN4RL1Q86UN2 441 aaPredicted RBP6.24□□□□□ -1.41
SMC1A-201ENST00000322213 RSG1Q9BU20 258 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 COX7A2P2O60397 106 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 VAMP5O95183 116 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 DEFA4P12838 97 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 FSTP19883 344 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 VDAC1P21796 283 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 ZBTB25P24278 435 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 BTCP35070 178 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 NIT1Q86X76 327 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 FAM234AQ9H0X4 552 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 SNRPCP09234 159 aaKnown RBP6.24□□□□□ -1.41
SMC1A-201ENST00000322213 GCH1P30793 250 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 WDR74Q6RFH5 385 aaPredicted RBP6.24□□□□□ -1.41
SMC1A-201ENST00000322213 OR4D11Q8NGI4 311 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 DEFB118Q96PH6 123 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PMCHL2Q9BQD1 86 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PCGF1Q9BSM1 259 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 MRPS17Q9Y2R5 130 aaKnown RBP6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PRAMEF5Q5TYX0 476 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 PRAMEF6Q5VXH4 476 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 MTCH2Q9Y6C9 303 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 OR4C45A6NMZ5 311 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 MASP2O00187 686 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 FGF17O60258 216 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 OR1C1Q15619 314 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 TSPAN32Q96QS1 320 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 GINS3Q9BRX5 216 aa6.24□□□□□ -1.41
SMC1A-201ENST00000322213 A8MWP6 167 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SNURFLB1AK76 121 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SELEP16581 610 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 HTR1DP28221 377 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 LBX1P52954 281 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 PMP22Q01453 160 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TGIF1Q15583 401 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 FDX2Q6P4F2 183 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 Q8IYB0 196 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 A6NCN8 305 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 HELTA6NFD8 242 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 OR5AL1P0C617 328 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 FZD5Q13467 585 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 DCAF10Q5QP82 559 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 VHLLQ6RSH7 139 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 EDARADDQ8WWZ3 215 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TXNDC17Q9BRA2 123 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 A6NJY4 79 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 COLCA2A8K830 154 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ITGB1BP1O14713 200 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF865P0CJ78 1059 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 FAM174AQ8TBP5 190 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 MIEN1Q9BRT3 115 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 MFRPQ9BY79 579 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SEBOXQ9HB31 216 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 PIPOXQ9P0Z9 390 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 HKR1P10072 659 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ATP6V0CP27449 155 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ERHP84090 104 aaKnown RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 NR0B2Q15466 257 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TBC1D28Q2M2D7 210 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF793Q6ZN11 406 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ASB5Q8WWX0 329 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 NDFIP1Q9BT67 221 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 COL25A1Q9BXS0 654 aaPredicted RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 CRYM-AS1A6NIL9 109 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 H0YIG0 161 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 MRPL33O75394 65 aaKnown RBP6.23□□□□□ -1.41
SMC1A-201ENST00000322213 LDLRAD2Q5SZI1 272 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 C6orf201Q7Z4U5 140 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 OXGR1Q96P68 337 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 SH3BGRL3Q9H299 93 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM38BQ9NVV0 291 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 TUBD1Q9UJT1 453 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 PCSK5Q92824 1860 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF253O75346 499 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 CA2P00918 260 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 PVRP15151 417 aa6.23□□□□□ -1.41
SMC1A-201ENST00000322213 IGFBP7Q16270 282 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms