RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 TRAPPC1Q9Y5R8 145 aa13.06□□□□□ -0.32
SCAP-202ENST00000320017 PCNX3Q9H6A9 2034 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 FREM2Q5SZK8 3169 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 NUPR1O60356 82 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 BGLAPP02818 100 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 IGHV4-34P06331 123 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 HNRNPA3P51991 378 aaKnown RBP13.05□□□□□ -0.32
SCAP-202ENST00000320017 SELENOTP62341 195 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 FOXF1Q12946 379 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 IL24Q13007 206 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 VAMP3Q15836 100 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 C6orf201Q7Z4U5 140 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 LYG1Q8N1E2 194 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 PHF7Q9BWX1 381 aaPredicted RBP13.05□□□□□ -0.32
SCAP-202ENST00000320017 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 LYRM4Q9HD34 91 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 G6PC2Q9NQR9 355 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 CRYM-AS1A6NIL9 109 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 TNFSF13O75888 250 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
SCAP-202ENST00000320017 RRADP55042 308 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 QRFPP83859 136 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 GNPNAT1Q96EK6 184 aaPredicted RBP13.05□□□□□ -0.32
SCAP-202ENST00000320017 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 NAA60Q9H7X0 242 aa13.05□□□□□ -0.32
SCAP-202ENST00000320017 MSTNO14793 375 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 CTSDP07339 412 aaPredicted RBP13.04□□□□□ -0.32
SCAP-202ENST00000320017 EGR4Q05215 589 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 FAM78BQ5VT40 261 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 LRRC3CA6NJW4 275 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 CEACAM18A8MTB9 384 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 ASAH2BP0C7U1 165 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 IL11P20809 199 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 ARL4DP49703 201 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 TMEM241Q24JQ0 296 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
SCAP-202ENST00000320017 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 ROM1Q03395 351 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 KCNMB1Q16558 191 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 TMEM252Q8N6L7 170 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 APH1AQ96BI3 265 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 CTHRC1Q96CG8 243 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 RSG1Q9BU20 258 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 TMEM242Q9NWH2 141 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 VDAC3Q9Y277 283 aa13.04□□□□□ -0.32
SCAP-202ENST00000320017 NUP210LQ5VU65 1888 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 NKX2-6A6NCS4 301 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 UTS2O95399 124 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 IFNA5P01569 189 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 TDGF1P13385 188 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 CDKN1AP38936 164 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 SPIN3Q5JUX0 258 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 H3BML4 177 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 OR2J2O76002 312 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 GCH1P30793 250 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 OR51G1Q8NGK1 321 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 RPL27P61353 136 aaKnown RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 ZFP36L1Q07352 338 aaKnown RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 TMPRSS7Q7RTY8 843 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 ATG4DQ86TL0 474 aaPredicted RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 NUDT10Q8NFP7 164 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 PBOV1Q9GZY1 135 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 PCED1AQ9H1Q7 454 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 GPR35Q9HC97 309 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 NAT8Q9UHE5 227 aa13.03□□□□□ -0.32
SCAP-202ENST00000320017 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
SCAP-202ENST00000320017 SHANK1Q9Y566 2161 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.32
SCAP-202ENST00000320017 FOXS1O43638 330 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 HRASP01112 189 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 TTRP02766 147 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 SERPINA7P05543 415 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.32
SCAP-202ENST00000320017 LDLRAD2Q5SZI1 272 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 RIPPLY2Q5TAB7 128 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 PGAM5Q96HS1 289 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 TBL1XR1Q9BZK7 514 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 RBKSQ9H477 322 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 GLRX2Q9NS18 164 aa13.02□□□□□ -0.32
SCAP-202ENST00000320017 UBE2J1Q9Y385 318 aaPredicted RBP13.02□□□□□ -0.32
SCAP-202ENST00000320017 TRDCB7Z8K6 153 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 FBXW4P57775 412 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 SCGB1C1Q8TD33 95 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 ATP5SQ99766 215 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 PLK3Q9H4B4 646 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.33
SCAP-202ENST00000320017 MED29Q9NX70 200 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms