RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 ZNF474Q6S9Z5 364 aaPredicted RBP13.54□□□□□ -0.24
SHISA2-201ENST00000319420 DHRS11Q6UWP2 260 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 TPRX1Q8N7U7 411 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 POC1AQ8NBT0 407 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 SLC34A2O95436 690 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 FAM87AP0C7U9 286 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 CBR1P16152 277 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 IL15RAQ13261 267 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 HERPUD1Q15011 391 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 SURF2Q15527 256 aaPredicted RBP13.54□□□□□ -0.24
SHISA2-201ENST00000319420 FAM180AQ6UWF9 173 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 FBXW12Q6X9E4 464 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 KIRREL1Q96J84 757 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
SHISA2-201ENST00000319420 PLSCR4Q9NRQ2 329 aa13.54□□□□□ -0.24
SHISA2-201ENST00000319420 TRBV6-7A0A0A0MS04 114 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 IGKV1D-13A0A0B4J2D9 117 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 IGHV1-18A0A0C4DH31 117 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 MLNRO43193 412 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 TK1P04183 234 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 CTSDP07339 412 aaPredicted RBP13.53□□□□□ -0.24
SHISA2-201ENST00000319420 IGKV1-13P0DP09 117 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 TMEM211Q6ICI0 200 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 C22orf34Q6ZV56 151 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 C2orf50Q96LR7 162 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 OPA3Q9H6K4 179 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 DECR2Q9NUI1 292 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 TREM2Q9NZC2 230 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 COL12A1Q99715 3063 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 CRYM-AS1A6NIL9 109 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 J3QT63 122 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 IGKV3-15P01624 115 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 COX5AP20674 150 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 CYCSP99999 105 aaKnown RBP13.53□□□□□ -0.24
SHISA2-201ENST00000319420 ELP2Q6IA86 826 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 FAM53AQ6NSI3 398 aaPredicted RBP13.53□□□□□ -0.24
SHISA2-201ENST00000319420 DPPA2Q7Z7J5 298 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 PRRX2Q99811 253 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 SYT3Q9BQG1 590 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 MS4A7Q9GZW8 240 aaPredicted RBP13.53□□□□□ -0.24
SHISA2-201ENST00000319420 CYTL1Q9NRR1 136 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 TMEM100Q9NV29 134 aa13.53□□□□□ -0.24
SHISA2-201ENST00000319420 OR2H2O95918 312 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 GCH1P30793 250 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 GGNBP1Q5YKI7 109 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 PIK3IP1Q96FE7 263 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 C12orf57Q99622 126 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 SMIM3Q9BZL3 60 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 BARX1Q9HBU1 254 aaPredicted RBP13.52□□□□□ -0.24
SHISA2-201ENST00000319420 Q9N2K0 584 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 C1orf123Q9NWV4 160 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 KCNIP3Q9Y2W7 256 aa13.52□□□□□ -0.24
SHISA2-201ENST00000319420 RBM7Q9Y580 266 aaKnown RBP13.52□□□□□ -0.24
SHISA2-201ENST00000319420 ABCA4P78363 2273 aa13.52□□□□□ -0.25
SHISA2-201ENST00000319420 IGKV1-6A0A0C4DH72 117 aa13.52□□□□□ -0.25
SHISA2-201ENST00000319420 OR5H1A6NKK0 313 aa13.52□□□□□ -0.25
SHISA2-201ENST00000319420 SNTB1Q13884 538 aaKnown RBP13.52□□□□□ -0.25
SHISA2-201ENST00000319420 OR2Z1Q8NG97 314 aa13.52□□□□□ -0.25
SHISA2-201ENST00000319420 TRAV20A0A0B4J274 112 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 IGHV2OR16-5A0A0B4J2B6 119 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 A8MXK9 166 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 LINC00587B1AMM8 73 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 HSPA12AO43301 675 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 FGF2P09038 288 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 RAC2P15153 192 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 RPL35P42766 123 aaKnown RBP13.51□□□□□ -0.25
SHISA2-201ENST00000319420 IGFL3Q6UXB1 125 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 ZNF565Q8N9K5 539 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 BVESQ8NE79 360 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 PLPPR2Q96GM1 343 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 TP53RKQ96S44 253 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 SLC25A32Q9H2D1 315 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 CCL28Q9NRJ3 127 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 MED9Q9NWA0 146 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 OR1A1Q9P1Q5 309 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 PURGQ9UJV8 347 aaKnown RBP13.51□□□□□ -0.25
SHISA2-201ENST00000319420 TRAPPC2LQ9UL33 140 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 CGAP01215 116 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 IL24Q13007 206 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 PRSS54Q6PEW0 395 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 Q6ZR03 302 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 GAPTQ8N292 157 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 NAA60Q9H7X0 242 aa13.51□□□□□ -0.25
SHISA2-201ENST00000319420 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
SHISA2-201ENST00000319420 MSMPQ1L6U9 139 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 ZNF818PQ6ZRF7 136 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 OR51H1Q8NH63 302 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 PLPPR1Q8TBJ4 325 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 SLC5A7Q9GZV3 580 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 PRSS44E7EML9 344 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 NAPSAO96009 420 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 GNRHRP30968 328 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 MPV17LQ2QL34 196 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 MRPL30Q8TCC3 161 aaKnown RBP13.5□□□□□ -0.25
SHISA2-201ENST00000319420 SPTBN1Q01082 2364 aaKnown RBP13.5□□□□□ -0.25
SHISA2-201ENST00000319420 LRP5LA4QPB2 252 aa13.5□□□□□ -0.25
SHISA2-201ENST00000319420 MBD3L4A6NDZ8 208 aaPredicted RBP13.5□□□□□ -0.25
SHISA2-201ENST00000319420 MBD3L3A6NE82 208 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms