RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ZNF391Q9UJN7 358 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ZDHHC8Q9ULC8 765 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 NDUFS8O00217 210 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ALOX12BO75342 701 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 HOXA6P31267 233 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 AMER3Q8N944 861 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PTX4Q96A99 478 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 C14orf144Q96I85 54 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 KIAA1551Q9HCM1 1747 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 A6NJY4 79 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 CDS2O95674 445 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 CD22P20273 847 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 SHBQ15464 509 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 LYZL2Q7Z4W2 148 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 BOD1Q96IK1 185 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 RCC2Q9P258 522 aaKnown RBP7.75□□□□□ -1.17
USF3-201ENST00000316407 PAQR9Q6ZVX9 377 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PRNTQ86SH4 94 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 CRYGNQ8WXF5 182 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 ELF5Q9UKW6 265 aaPredicted RBP7.75□□□□□ -1.17
USF3-201ENST00000316407 FAM169BQ8N8A8 192 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 EDARADDQ8WWZ3 215 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 FGF21Q9NSA1 209 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 PCNX1Q96RV3 2341 aa7.75□□□□□ -1.17
USF3-201ENST00000316407 TLCD2A6NGC4 264 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 NKX2-6A6NCS4 301 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 ZNF324O75467 553 aaPredicted RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 OR10AC1Q8NH08 325 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 BADQ92934 168 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 DEFB127Q9H1M4 99 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 MED13LQ71F56 2210 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 LOC105371267A0A1B0GV96 52 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 FAM157AC9JC47 383 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 SAMD13Q5VXD3 122 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 METRNLQ641Q3 311 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 OR1F12Q8NHA8 337 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 ZG16BQ96DA0 208 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 LNP1A1A4G5 178 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 ZNF275Q9NSD4 429 aaPredicted RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 MRGPRDQ8TDS7 321 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 IGKV6-21A0A0C4DH24 114 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 CA1P00915 261 aaPredicted RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 MDH2P40926 338 aaKnown RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 FUT6P51993 359 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 DUSP23Q9BVJ7 150 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 PARLQ9H300 379 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 RIGQ13278 110 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 PARM1Q6UWI2 310 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 GHITMQ9H3K2 345 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 TMEM30CPA0ZSE6 113 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 MS4A18H0YCH9 400 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 NMBP08949 121 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 MS4A18Q3C1V0 323 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 ZNF774Q6NX45 483 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 ADTRPQ96IZ2 230 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 FIGNL2A6NMB9 653 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 KLKB1P03952 638 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 SMIM13P0DJ93 91 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 C12orf73Q69YU5 71 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 WFDC8Q8IUA0 241 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 SLC25A43Q8WUT9 341 aaPredicted RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 IL20Q9NYY1 176 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 FAHD2BQ6P2I3 314 aaPredicted RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 OXGR1Q96P68 337 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 TLNRD1Q9H1K6 362 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 SEBOXQ9HB31 216 aaPredicted RBP7.74□□□□□ -1.17
USF3-201ENST00000316407 ADAMTSL1Q8N6G6 1762 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 SPRY3O43610 288 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 MPZL1O95297 269 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 TYMSP04818 313 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 BCL2P10415 239 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 SLC25A34Q6PIV7 304 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 R4GN57 208 aa7.74□□□□□ -1.17
USF3-201ENST00000316407 OR4C45A6NMZ5 311 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 CFDP00746 253 aaPredicted RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 ZNF865P0CJ78 1059 aaPredicted RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 ZNF117Q03924 483 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 OOEPA6NGQ2 149 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 GCSAMLQ5JQS6 135 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 SLC25A42Q86VD7 318 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 IL19Q9UHD0 177 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 ABCA3Q99758 1704 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 PLA2G10O15496 165 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 CD74P04233 296 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 FXYD3Q14802 87 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 GDE1Q9NZC3 331 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 SRP14P37108 136 aaKnown RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 EWSR1Q01844 656 aaKnown RBP eCLIP7.73□□□□□ -1.17
USF3-201ENST00000316407 MRGPRFQ96AM1 343 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 LRRC3BQ96PB8 259 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 PARP11Q9NR21 331 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 ROS1P08922 2347 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 FZD5Q13467 585 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 TMEM95Q3KNT9 176 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 DNAJC4Q9NNZ3 241 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms