RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 ERGIC1Q969X5 290 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 WDYHV1Q96HA8 205 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 MTCH1Q9NZJ7 389 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
CHFR-202ENST00000315585 CLEC18AA5D8T8 446 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 UMAD1C9J7I0 102 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 SIGLEC5O15389 551 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 TUSC2O75896 110 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 PRH1P02810 166 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 CD80P33681 288 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 Q8IYB0 196 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 CLEC18CQ8NCF0 446 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 COL25A1Q9BXS0 654 aaPredicted RBP12.76□□□□□ -0.37
CHFR-202ENST00000315585 TMEM231Q9H6L2 316 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 IFT22Q9H7X7 185 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 CEACAM4O75871 244 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 ZNF205O95201 554 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
CHFR-202ENST00000315585 BAXQ07812 192 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 TREM2Q9NZC2 230 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 LIPGQ9Y5X9 500 aa12.76□□□□□ -0.37
CHFR-202ENST00000315585 IGHG3P01860 377 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 PRKACAP17612 351 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 WT1P19544 449 aaPredicted RBP12.75□□□□□ -0.37
CHFR-202ENST00000315585 UCP1P25874 307 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 UCP2P55851 309 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 FBXW9Q5XUX1 488 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 MOB1BQ7L9L4 216 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 OR5D13Q8NGL4 314 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 BOD1Q96IK1 185 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 GLRX2Q9NS18 164 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 FAM96BQ9Y3D0 163 aa12.75□□□□□ -0.37
CHFR-202ENST00000315585 TNRC6AQ8NDV7 1962 aaKnown RBP12.75□□□□□ -0.37
CHFR-202ENST00000315585 SLC22A20A6NK97 555 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 H0Y980 276 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 CCL2P13500 99 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SNCAP37840 140 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 TGFBR3Q03167 851 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 ZNF616Q08AN1 781 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 ZADH2Q8N4Q0 377 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 DMBX1Q8NFW5 382 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 OR10J5Q8NHC4 309 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SMCO4Q9NRQ5 59 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 CACFD1Q9UGQ2 172 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 POLDIP2Q9Y2S7 368 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 WRBO00258 174 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SCTP09683 121 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SLC25A6P12236 298 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 PAX6P26367 422 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 EWSR1Q01844 656 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHFR-202ENST00000315585 DAZAP2Q15038 168 aaPredicted RBP12.74□□□□□ -0.37
CHFR-202ENST00000315585 TBC1D28Q2M2D7 210 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 RNFT1Q5M7Z0 435 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
CHFR-202ENST00000315585 GAPTQ8N292 157 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 C19orf12Q9NSK7 152 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
CHFR-202ENST00000315585 NKX2-6A6NCS4 301 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 BTBD17A6NE02 478 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 DEGS1O15121 323 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 PITX3O75364 302 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 GLI4P10075 376 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 OR8G1Q15617 311 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 HFEQ30201 348 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 MIDNQ504T8 468 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
CHFR-202ENST00000315585 P4HA3Q7Z4N8 544 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 GNPNAT1Q96EK6 184 aaPredicted RBP12.73□□□□□ -0.37
CHFR-202ENST00000315585 RTL8AQ9BWD3 113 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
CHFR-202ENST00000315585 OR2W1Q9Y3N9 320 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 J3QT63 122 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 AGPAT2O15120 278 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 NGFP01138 241 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 WNT2P09544 360 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 Q6ZPA2 131 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 ZNF818PQ6ZRF7 136 aa12.73□□□□□ -0.37
CHFR-202ENST00000315585 EIF5A2Q9GZV4 153 aaKnown RBP12.73□□□□□ -0.37
CHFR-202ENST00000315585 EP300Q09472 2414 aaPredicted RBP12.72□□□□□ -0.37
CHFR-202ENST00000315585 A0A1B0GW64 132 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 OR8U9P0C7N5 309 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 C3AR1Q16581 482 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 GUK1Q16774 197 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 ASCL5Q7RTU5 278 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 GMPPAQ96IJ6 420 aaPredicted RBP12.72□□□□□ -0.37
CHFR-202ENST00000315585 UNKLQ9H9P5 680 aaKnown RBP12.72□□□□□ -0.37
CHFR-202ENST00000315585 AQP7O14520 342 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 NPBWR1P48145 328 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 ID3Q02535 119 aa12.72□□□□□ -0.37
CHFR-202ENST00000315585 NHLH2Q02577 135 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms