RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF660Q6AZW8 331 aaPredicted RBP12.03□□□□□ -0.48
SPAST-201ENST00000315285 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 LHFPL5Q8TAF8 219 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 TMEM230Q96A57 120 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 DBX1A6NMT0 343 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 SULT1A1P50225 295 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 MRGPRFQ96AM1 343 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 RSRP1Q9BUV0 290 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 OOEPA6NGQ2 149 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 AP4M1O00189 453 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 HSBP1O75506 76 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 FBP1P09467 338 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
SPAST-201ENST00000315285 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 OR2M7Q8NG81 312 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 TRAV39A0A0B4J263 110 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 MS4A18H0YCH9 400 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 CFDP00746 253 aaPredicted RBP12.03□□□□□ -0.48
SPAST-201ENST00000315285 OPN1MWP04001 364 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 RCC1P18754 421 aaPredicted RBP12.03□□□□□ -0.48
SPAST-201ENST00000315285 OPRK1P41145 380 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 TRIP6Q15654 476 aaKnown RBP12.03□□□□□ -0.48
SPAST-201ENST00000315285 MS4A18Q3C1V0 323 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 FAM209AQ5JX71 171 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 C19orf48Q6RUI8 117 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 XKRY2A2RUG3 117 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 CELA2AP08217 269 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 IGLV3-21P80748 117 aaPredicted RBP12.02□□□□□ -0.48
SPAST-201ENST00000315285 MYPOPQ86VE0 399 aaPredicted RBP12.02□□□□□ -0.48
SPAST-201ENST00000315285 ZNF519Q8TB69 540 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 R3HDM4Q96D70 268 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 NDFIP1Q9BT67 221 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 GPR132Q9UNW8 380 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 TIMM9Q9Y5J7 89 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.48
SPAST-201ENST00000315285 LCTP09848 1927 aa12.02□□□□□ -0.48
SPAST-201ENST00000315285 OR4S2Q8NH73 311 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 DTD1Q8TEA8 209 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 IL36GQ9NZH8 169 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 SERTM2A0A1B0GWG4 89 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 hADV38S2A0JD32 116 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 CA11O75493 328 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 SLC25A47Q6Q0C1 308 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 OR4A4PQ8NGN8 299 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 SLC26A1Q9H2B4 701 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 NPDC1Q9NQX5 325 aaPredicted RBP12.02□□□□□ -0.49
SPAST-201ENST00000315285 NAT8Q9UHE5 227 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 SCN2AQ99250 2005 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 SVILO95425 2214 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 TMEM50BP56557 158 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 PSG4Q00888 419 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 TMEM108Q6UXF1 575 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 GAL3ST2Q9H3Q3 398 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
SPAST-201ENST00000315285 DCAF10Q5QP82 559 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 SLC25A45Q8N413 288 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 BARX1Q9HBU1 254 aaPredicted RBP12.01□□□□□ -0.49
SPAST-201ENST00000315285 FKBP11Q9NYL4 201 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 NAT8BQ9UHF3 227 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 LTBP1Q14766 1721 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 A0A1B0GU03 582 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 AQP3Q92482 292 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 LHFPL6Q9Y693 200 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 FOSL1P15407 271 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 GNG4P50150 75 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 ACSM6Q6P461 480 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 SLC24A4Q8NFF2 622 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 APOBEC4Q8WW27 367 aaKnown RBP12.01□□□□□ -0.49
SPAST-201ENST00000315285 RGP1Q92546 391 aaPredicted RBP12.01□□□□□ -0.49
SPAST-201ENST00000315285 H2BFSP57053 126 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 IQCJQ1A5X6 159 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 CCL17Q92583 94 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 ADTRPQ96IZ2 230 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 MANBALQ9NQG1 85 aa12.01□□□□□ -0.49
SPAST-201ENST00000315285 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
SPAST-201ENST00000315285 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
SPAST-201ENST00000315285 SEMA7AO75326 666 aa12□□□□□ -0.49
SPAST-201ENST00000315285 CRYBA1P05813 215 aa12□□□□□ -0.49
SPAST-201ENST00000315285 DLK1P80370 383 aa12□□□□□ -0.49
SPAST-201ENST00000315285 MRPS11P82912 194 aaKnown RBP12□□□□□ -0.49
SPAST-201ENST00000315285 FBXW9Q5XUX1 488 aa12□□□□□ -0.49
SPAST-201ENST00000315285 LINC00596Q86U02 117 aa12□□□□□ -0.49
SPAST-201ENST00000315285 ANGPTL4Q9BY76 406 aa12□□□□□ -0.49
SPAST-201ENST00000315285 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
SPAST-201ENST00000315285 FAM206AQ9NX38 181 aa12□□□□□ -0.49
SPAST-201ENST00000315285 EGR4Q05215 589 aa12□□□□□ -0.49
SPAST-201ENST00000315285 FAM78BQ5VT40 261 aa12□□□□□ -0.49
SPAST-201ENST00000315285 VAX2Q9UIW0 290 aa12□□□□□ -0.49
SPAST-201ENST00000315285 NEUROG3Q9Y4Z2 214 aa12□□□□□ -0.49
SPAST-201ENST00000315285 ARL2-SNX15V9GYD0 113 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms