RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 IL1AP01583 271 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FAM90A15PP0C7V4 464 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FAM90A13PP0C7W8 464 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FAM90A14PP0C7W9 464 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FAM90A24PP0C7X0 464 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ZNF728P0DKX0 622 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 HOXB4P17483 251 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SRP14P37108 136 aaKnown RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 HCP5Q6MZN7 132 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 TRAPPC6BQ86SZ2 158 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 OR4K15Q8NH41 348 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 MRGPRDQ8TDS7 321 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SLC25A46Q96AG3 418 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SLC25A38Q96DW6 304 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ARHGAP5-AS1Q96IT6 56 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 HDHD3Q9BSH5 251 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ZMAT3Q9HA38 289 aaKnown RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ETAA1Q9NY74 926 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ZNF69Q9UC07 566 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ELF5Q9UKW6 265 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 RAB22AQ9UL26 194 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 hADV38S2A0JD32 116 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FAM172BPA6NC97 362 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 C17orf98A8MV24 154 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 MT-ND4P03905 459 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 CGB3P0DN86 165 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 CGB7P0DN87 165 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SRD5A1P18405 259 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 RCC1P18754 421 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 PAX6P26367 422 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SSTR5P35346 364 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 GLP1RP43220 463 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 MEF2CQ06413 473 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 C17orf58Q2M2W7 97 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SLC35E4Q6ICL7 350 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ZNF497Q6ZNH5 498 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 KIR3DL3Q8N743 410 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 RFESDQ8TAC1 157 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 NANPQ8TBE9 248 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 ZNF714Q96N38 554 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 NEDD4LQ96PU5 975 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 URM1Q9BTM9 101 aaKnown RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 DCSTAMPQ9H295 470 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 SPACA1Q9HBV2 294 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 CEPT1Q9Y6K0 416 aa7.44□□□□□ -1.22
PDE4D-201ENST00000309641 FBN1P35555 2871 aaKnown RBP7.44□□□□□ -1.22
PDE4D-201ENST00000309641 TRGV10A0A0A0MS01 117 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 M0R1W7 72 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 HNF1AP20823 631 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 EPHA1P21709 976 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 PRTN3P24158 256 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 CDK2P24941 298 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 SRSF2Q01130 221 aaKnown RBP7.43□□□□□ -1.22
PDE4D-201ENST00000309641 PAX5Q02548 391 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 PRAMEF5Q5TYX0 476 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 DTX3Q8N9I9 347 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 CORO2AQ92828 525 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 ISOC1Q96CN7 298 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 DMRTB1Q96MA1 342 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 PECRQ9BY49 303 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 ATG5Q9H1Y0 275 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 METTL8Q9H825 291 aaKnown RBP7.43□□□□□ -1.22
PDE4D-201ENST00000309641 PLEKHJ1Q9NW61 149 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 ATRQ13535 2644 aa7.43□□□□□ -1.22
PDE4D-201ENST00000309641 A0A075B6Q4 140 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 MDFIC2A0A1B0GVS7 189 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 TMEM30CPA0ZSE6 113 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 H3BMQ9 156 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 IGHV3-7P01780 117 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 FAM157CP0CG43 387 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 IGHV1-8P0DP01 117 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 GNB3P16520 340 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 RAB6AP20340 208 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 COX7A1P24310 79 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 KCNJ3P48549 501 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 C1orf122Q6ZSJ8 110 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 Q6ZTK2 550 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 GAPTQ8N292 157 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 MRPL30Q8TCC3 161 aaKnown RBP7.42□□□□□ -1.22
PDE4D-201ENST00000309641 C17orf50Q8WW18 174 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 RBM38Q9H0Z9 239 aaKnown RBP7.42□□□□□ -1.22
PDE4D-201ENST00000309641 UNKLQ9H9P5 680 aaKnown RBP7.42□□□□□ -1.22
PDE4D-201ENST00000309641 RHBDL2Q9NX52 303 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 ZNRD1Q9P1U0 126 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 AK3Q9UIJ7 227 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 NUP50Q9UKX7 468 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 UBE2J1Q9Y385 318 aaPredicted RBP7.42□□□□□ -1.22
PDE4D-201ENST00000309641 FUOMA2VDF0 154 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 TMBIM6P55061 237 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 BLMHQ13867 455 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 RBM39Q14498 530 aaKnown RBP7.42□□□□□ -1.22
PDE4D-201ENST00000309641 LTC4SQ16873 150 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 LDLRAD2Q5SZI1 272 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 USP43Q70EL4 1123 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 OR56B1Q8NGI3 324 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 OR10R2Q8NGX6 335 aa7.42□□□□□ -1.22
PDE4D-201ENST00000309641 RAB2BQ8WUD1 216 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms