RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 FGF7P21781 194 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 THBS3P49746 956 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 KCNMB1Q16558 191 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 GPR137Q96N19 417 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 GUCD1Q96NT3 240 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 MMP26Q9NRE1 261 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 NBASA2RRP1 2371 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 HRASP01112 189 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 RRASP10301 218 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 GZMHP20718 246 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CHRNB4P30926 498 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CA5BP1Q8WTZ4 195 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 WNT2BQ93097 391 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 NPAS1Q99742 590 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 UQCC1Q9NVA1 299 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 RPH3ALQ9UNE2 315 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 LOC390937A0A1W2PQ73 354 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 F6UZH7 168 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CDS2O95674 445 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CT45A6P0DMU7 189 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CT45A5P0DMU8 189 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CT45A7P0DMV0 189 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 GUK1Q16774 197 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CT45A1Q5HYN5 189 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 CT45A3Q8NHU0 189 aa9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 DAZAP1Q96EP5 407 aaKnown RBP9.89□□□□□ -0.83
PCDHGC3-201ENST00000308177 ROS1P08922 2347 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 GNB1P62873 340 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 HFEQ30201 348 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM219AQ8IW50 185 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 NUDT16L1Q9BRJ7 211 aaKnown RBP9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 SEMA5BQ9P283 1151 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 C9orf172C9J069 976 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 C16orf97H3BN30 126 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 CLPSP04118 112 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 P2RY1P47900 373 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 SLC38A11Q08AI6 406 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 USF2Q15853 346 aaPredicted RBP9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 CLEC9AQ6UXN8 241 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 HIST2H3AQ71DI3 136 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 FDCSPQ8NFU4 85 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 OR4F5Q8NH21 305 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 ANGPTL6Q8NI99 470 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 Q96M66 194 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 OR4F4Q96R69 305 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 SOX7Q9BT81 388 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 LINC00470Q9BZP3 86 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 OPN3Q9H1Y3 402 aaPredicted RBP9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 RNF122Q9H9V4 155 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 HSF4Q9ULV5 492 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 TNFSF18Q9UNG2 199 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 ST8SIA5O15466 376 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 SLC25A4P12235 298 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 AKR1E2Q96JD6 320 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 POM121L2Q96KW2 1035 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 KLHDC3Q9BQ90 382 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 PLXNA4Q9HCM2 1894 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 A0A087WV48 116 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 NKX2-6A6NCS4 301 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 TXNL1O43396 289 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 SYNGR2O43760 224 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 OR2C1O95371 312 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 CXCL2P19875 107 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 TMEM65Q6PI78 240 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 TMEM45BQ96B21 275 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 CXorf58Q96LI9 332 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 GAL3ST2Q9H3Q3 398 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 RNF7Q9UBF6 113 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 ATPIF1Q9UII2 106 aa9.88□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A10PA6NDY2 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A18PA6NE21 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A16PA6NEW6 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A20PA6NIJ5 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A8PA6NJQ4 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A7PA6NKC0 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A22PA8MWA6 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A12PA8MX19 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A5PA8MXJ8 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A23PA8MXZ1 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 AQP7O14520 342 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 SYNGR1O43759 233 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 CHST1O43916 411 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 CD74P04233 296 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A15PP0C7V4 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A13PP0C7W8 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A14PP0C7W9 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 FAM90A24PP0C7X0 464 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 SLC25A6P12236 298 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 UNC119Q13432 240 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 ZNF345Q14585 488 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 RSPO4Q2I0M5 234 aaPredicted RBP9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 IGSF11Q5DX21 431 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 C1orf185Q5T7R7 199 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 HSD17B13Q7Z5P4 300 aaPredicted RBP9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 BPIFCQ8NFQ6 507 aa9.87□□□□□ -0.83
PCDHGC3-201ENST00000308177 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms