RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CEACAM21Q3KPI0 293 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 TBC1D26Q86UD7 250 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 GVQW1Q8N7I0 195 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 OR8G5Q8NG78 346 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 DYNC2LI1Q8TCX1 351 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 CHRNA10Q9GZZ6 450 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 RECKO95980 971 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 BTG1P62324 171 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 TEX30Q5JUR7 227 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 Q6ZT83 130 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 OR10A7Q8NGE5 316 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 KLF14Q8TD94 323 aaPredicted RBP9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 RNF133Q8WVZ7 376 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 LHX4Q969G2 390 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 PLEKHA2Q9HB19 425 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 DOCK9Q9BZ29 2069 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 FER1L5A0AVI2 2057 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 J3KRW8 73 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 HMGN3Q15651 99 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 TMEM123Q8N131 208 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 BCL2L2Q92843 193 aaPredicted RBP9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 SIRT7Q9NRC8 400 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 UMODP07911 640 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 FBP1P09467 338 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 LCN2P80188 198 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 MPV17LQ2QL34 196 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF787Q6DD87 383 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 CCDC190Q86UF4 302 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC51BQ86UW2 128 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 IGHV3-72A0A0B4J1Y9 119 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 A0A1W2PNV4 684 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 GAPDHP04406 335 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC25A5P05141 298 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 SMIM18P0DKX4 95 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 HLA-DRB3P79483 266 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 DRAXINQ8NBI3 349 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 NPAP1Q9NZP6 1156 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 TMEM229AB2RXF0 380 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 NDUFA2O43678 99 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 TIMM23BQ5SRD1 257 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 HIST2H3AQ71DI3 136 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 RNASE6Q93091 150 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 CHST5Q9GZS9 411 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC25A32Q9H2D1 315 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC31A2O15432 143 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 CEBPDP49716 269 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 IGHV3-21A0A0B4J1V1 117 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 WISP3O95389 354 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 GIPP09681 153 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF439Q8NDP4 499 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 ZPLD1Q8TCW7 415 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 CHCHD2Q9Y6H1 151 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 GNLYP22749 145 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 PLAC9Q5JTB6 97 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 DUSP18Q8NEJ0 188 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 RAB29O14966 203 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC25A42Q86VD7 318 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 BAGE3Q86Y29 109 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 BAGE2Q86Y30 109 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF485Q8NCK3 441 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 PCNPQ8WW12 178 aaKnown RBP9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 ABHD14AQ9BUJ0 271 aa9.29□□□□□ -0.92
SYNPO2-201ENST00000307142 SIP14410 1827 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 F5H697 171 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 PYCARD-AS1I3L0S3 204 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 CNN1P51911 297 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 OR1L4Q8NGR5 311 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF552Q9H707 407 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 NAA60Q9H7X0 242 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 DBX1A6NMT0 343 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 KRBOX1C9JBD0 128 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 OR2J3O76001 311 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 ZFP36L1Q07352 338 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 RBPMS2Q6ZRY4 209 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 LFNGQ8NES3 379 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 HGDQ93099 445 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 GHITMQ9H3K2 345 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 BIN3Q9NQY0 253 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 TUBG2Q9NRH3 451 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 UQCC1Q9NVA1 299 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 PITPNC1Q9UKF7 332 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 V9GYS6 101 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 SNAI3Q3KNW1 292 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 LINC00303Q3SY05 128 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 Q8WTZ3 238 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 ADAT3Q96EY9 351 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 C1QCP02747 245 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 PRSS53Q2L4Q9 553 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 C10orf111Q8N326 155 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 NECAP1Q8NC96 275 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 AHCTF1Q8WYP5 2266 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 LEUTXA8MZ59 168 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms