RNA–Protein interactions for RNA: ENST00000305354.4

TM4SF4-201, Transcript of transmembrane 4 L six family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF4, Length 2,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-201ENST00000305354 FAM74A7A6NL05 159 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 WNT2P09544 360 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 MUC1P15941 1255 aaPredicted RBP13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 NKX2-1P43699 371 aaPredicted RBP13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 UBE2NP61088 152 aaKnown RBP13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 GUCA2BQ16661 112 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 OR5D13Q8NGL4 314 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 BOD1Q96IK1 185 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 KIRREL1Q96J84 757 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 POLDIP2Q9Y2S7 368 aa13.1□□□□□ -0.31
TM4SF4-201ENST00000305354 BDP1A6H8Y1 2624 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 IGKV1D-13A0A0B4J2D9 117 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 NPIPB11E5RHQ5 1161 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 RNASEK-C17orf49H0YIS7 233 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 TOR1AO14656 332 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 SMPD2O60906 423 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 CD5P06127 495 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 IGKV1-13P0DP09 117 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 SPP1P10451 314 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 MMP9P14780 707 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 SHEQ5VZ18 495 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 PCSK4Q6UW60 755 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 PLA2G2EQ9NZK7 142 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 LUZP4Q9P127 313 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 STRAPQ9Y3F4 350 aaKnown RBP13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 KNTC1P50748 2209 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 CDRT15L2A8MXV6 281 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 DANCRP0C864 163 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 VDAC1P21796 283 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 PPP1CBP62140 327 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 OR2C3Q8N628 320 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 OR10J5Q8NHC4 309 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 BSCL2Q96G97 398 aaPredicted RBP13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 TLNRD1Q9H1K6 362 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 OR51B6Q9H340 312 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 WFDC1Q9HC57 220 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 CCL28Q9NRJ3 127 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 OR2W1Q9Y3N9 320 aa13.09□□□□□ -0.31
TM4SF4-201ENST00000305354 HS3ST1O14792 307 aa13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 SELEP16581 610 aa13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 DVL1P1P54792 670 aaPredicted RBP13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 EWSR1Q01844 656 aaKnown RBP eCLIP13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 GABRA6Q16445 453 aa13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 ZNF324BQ6AW86 544 aaPredicted RBP13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 Q6P435 159 aa13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 RDH5Q92781 318 aa13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 SLC25A31Q9H0C2 315 aa13.08□□□□□ -0.32
TM4SF4-201ENST00000305354 HSD17B6O14756 317 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 RAC2P15153 192 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 ZNF44P15621 663 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 SPATA46Q5T0L3 261 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 INO80CQ6PI98 192 aaPredicted RBP13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 TMPRSS7Q7RTY8 843 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 C17orf78Q8N4C9 275 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 FAM96BQ9Y3D0 163 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 MUC3AQ02505 3323 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 ADAM20O43506 726 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 PITX3O75364 302 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 RHBDL1O75783 438 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 TSPAN15O95858 294 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 H2AFB1P0C5Y9 115 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 IGHV1-2P23083 117 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 NOVA1P51513 510 aaKnown RBP13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 ERVK11-1P61568 191 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 ZNF266Q14584 549 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 FAM214BQ7L5A3 538 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 PLEKHF2Q9H8W4 249 aa13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 LYRM2Q9NU23 88 aaPredicted RBP13.07□□□□□ -0.32
TM4SF4-201ENST00000305354 TMEM210A6NLX4 147 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 IQCF6A8MYZ5 107 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 PGLYRP1O75594 196 aaPredicted RBP13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 SLC25A6P12236 298 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 F2RP25116 425 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 UCP2P55851 309 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 VAMP2P63027 116 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 PMP22Q01453 160 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 NHLH2Q02577 135 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 GUSBP1Q15486 140 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 IGFL2Q6UWQ7 119 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 CLEC9AQ6UXN8 241 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 Q6ZT83 130 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 C5orf24Q7Z6I8 188 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 ADAT1Q9BUB4 502 aaKnown RBP13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 NDRG3Q9UGV2 375 aa13.06□□□□□ -0.32
TM4SF4-201ENST00000305354 FREM2Q5SZK8 3169 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms