RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TRAPPC2BP0DI82 140 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 MUC1P15941 1255 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-202ENST00000302316 SEC61A1P61619 476 aaKnown RBP10.87□□□□□ -0.67
CCDC7-202ENST00000302316 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-202ENST00000302316 C4orf46Q504U0 113 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 KRBOX4Q5JUW0 171 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 TEX36Q5VZQ5 186 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 C5orf24Q7Z6I8 188 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 CAPSLQ8WWF8 208 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 COQ2Q96H96 371 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 SNX22Q96L94 193 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 TMPRSS13Q9BYE2 586 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 SHARPINQ9H0F6 387 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 KIF25Q9UIL4 384 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 FBXO9Q9UK97 447 aaPredicted RBP10.87□□□□□ -0.67
CCDC7-202ENST00000302316 MGAT4AQ9UM21 535 aa10.87□□□□□ -0.67
CCDC7-202ENST00000302316 ARFGEF3Q5TH69 2177 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 ABCA4P78363 2273 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 HRNRQ86YZ3 2850 aaPredicted RBP10.86□□□□□ -0.67
CCDC7-202ENST00000302316 FLNCQ14315 2725 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 SSNA1O43805 119 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 GYPAP02724 150 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 SOD3P08294 240 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 FCGR2CP31995 323 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 CD300CQ08708 224 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 BAMBIQ13145 260 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 EDDM3AQ14507 147 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 ZNF660Q6AZW8 331 aaPredicted RBP10.86□□□□□ -0.67
CCDC7-202ENST00000302316 SLC36A1Q7Z2H8 476 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 ZNRF1Q8ND25 227 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 OR4A4PQ8NGN8 299 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 SCGB3A2Q96PL1 93 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 MED28Q9H204 178 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 LIME1Q9H400 295 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 UBTD1Q9HAC8 227 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 MBNL3Q9NUK0 354 aaKnown RBP10.86□□□□□ -0.67
CCDC7-202ENST00000302316 ZNF69Q9UC07 566 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 MYO18BQ8IUG5 2567 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
CCDC7-202ENST00000302316 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 MEIKINA0A087WXM9 373 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 TRAV38-1A0A0B4J264 116 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 CEACAM18A8MTB9 384 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PPIAL4DF5H284 164 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 LGALS8O00214 317 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 CREBL2O60519 120 aaPredicted RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 CCNKO75909 580 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PGAM2P15259 253 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 ECI1P42126 302 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 HERPUD1Q15011 391 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 C11orf71Q6IPW1 123 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 DHRS11Q6UWP2 260 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PRR18Q8N4B5 295 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 ZNF561Q8N587 486 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 TPRX1Q8N7U7 411 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 OR52B4Q8NGK2 314 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 ALX4Q9H161 411 aaPredicted RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 ZNF665Q9H7R5 613 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 RALYQ9UKM9 306 aaKnown RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 MAB21L2Q9Y586 359 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 NKX6-3A6NJ46 265 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 MGST3O14880 152 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 CD8AP01732 235 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 TK1P04183 234 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 HNRNPCP07910 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 CTXN2P0C2S0 81 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 OR4E1P0C645 316 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 DANCRP0C864 163 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 NFYAP23511 347 aaPredicted RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 GLIPR1P48060 266 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 FXYD4P59646 89 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 HFEQ30201 348 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PEG10Q86TG7 708 aaKnown RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 IL1F10Q8WWZ1 152 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 TOMM40LQ969M1 308 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 PPP1R14BQ96C90 147 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 MED30Q96HR3 178 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 KIRREL1Q96J84 757 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 GAFA1Q96PS6 74 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 CCL13Q99616 98 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 FXYD6Q9H0Q3 95 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 RAB1BQ9H0U4 201 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 MYOZ1Q9NP98 299 aaPredicted RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 GPR132Q9UNW8 380 aa10.85□□□□□ -0.67
CCDC7-202ENST00000302316 KLF2Q9Y5W3 355 aaPredicted RBP10.85□□□□□ -0.67
CCDC7-202ENST00000302316 IGKV1-6A0A0C4DH72 117 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 A8MV72 311 aaPredicted RBP10.84□□□□□ -0.67
CCDC7-202ENST00000302316 SNRPGP15A8MWD9 76 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 K7N7A8 449 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 SELLP14151 372 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 PI3P19957 117 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 HERV-K104P61576 105 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 PAX5Q02548 391 aa10.84□□□□□ -0.67
CCDC7-202ENST00000302316 SURF2Q15527 256 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms