RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 ZNF574Q6ZN55 896 aaPredicted RBP12.91□□□□□ -0.34
CDH23-202ENST00000299366 CT55Q8WUE5 264 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 ACY3Q96HD9 319 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 GFI1Q99684 422 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 SCTP09683 121 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 APELAP0DMC3 54 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 SCAND1P57086 179 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 RPP30P78346 268 aaKnown RBP12.91□□□□□ -0.34
CDH23-202ENST00000299366 ZNF90Q03938 601 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 GAR1Q9NY12 217 aaKnown RBP12.91□□□□□ -0.34
CDH23-202ENST00000299366 STARD10Q9Y365 291 aa12.91□□□□□ -0.34
CDH23-202ENST00000299366 LRP5LA4QPB2 252 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 RPS2P15880 293 aaKnown RBP12.9□□□□□ -0.34
CDH23-202ENST00000299366 FGF11Q92914 225 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 C5orf66Q9H5L9 145 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 ZNF355PQ9NSJ1 428 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 NPTNQ9Y639 398 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 NLRC5Q86WI3 1866 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 TRBV5-7A0A0A0MS05 114 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 ZIC3O60481 467 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 YIF1AO95070 293 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 SRD5A2P31213 254 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 SRSF3P84103 164 aaKnown RBP12.9□□□□□ -0.34
CDH23-202ENST00000299366 CEBPEQ15744 281 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 LIAT1Q6ZQX7 453 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 NPBWR2P48146 333 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 PSG4Q00888 419 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 UNC119Q13432 240 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 GPX7Q96SL4 187 aaPredicted RBP12.9□□□□□ -0.34
CDH23-202ENST00000299366 FAM173AQ9BQD7 235 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 CHST5Q9GZS9 411 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 LIN7CQ9NUP9 197 aaKnown RBP12.9□□□□□ -0.34
CDH23-202ENST00000299366 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
CDH23-202ENST00000299366 ROM1Q03395 351 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 HFEQ30201 348 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 DAZAP1Q96EP5 407 aaKnown RBP12.89□□□□□ -0.35
CDH23-202ENST00000299366 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
CDH23-202ENST00000299366 SNX22Q96L94 193 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 G6PC2Q9NQR9 355 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 J3QRE1 110 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 IL2RAP01589 272 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
CDH23-202ENST00000299366 LIFP15018 202 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 ATP6V0CP27449 155 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 LYG1Q8N1E2 194 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 TOLLIPQ9H0E2 274 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 G3V3Q6 166 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 TRAF3IP2O43734 574 aaPredicted RBP12.89□□□□□ -0.35
CDH23-202ENST00000299366 IGKV3-11P04433 115 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 DTYMKP23919 212 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 H3F3AP84243 136 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 ZNF718Q3SXZ3 478 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 FFAR4Q5NUL3 377 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 POC1BQ8TC44 478 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 PTPN13Q12923 2485 aa12.89□□□□□ -0.35
CDH23-202ENST00000299366 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
CDH23-202ENST00000299366 SLC38A11Q08AI6 406 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 SSMEM1Q8WWF3 244 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 CFHR5Q9BXR6 569 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 DECR2Q9NUI1 292 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 DOK5Q9P104 306 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 CSPG4Q6UVK1 2322 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 LINC00587B1AMM8 73 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 FBP1P09467 338 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDH23-202ENST00000299366 ATP1A1-AS1Q5TC04 95 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 WDR74Q6RFH5 385 aaPredicted RBP12.88□□□□□ -0.35
CDH23-202ENST00000299366 ZNF826PQ6ZT77 177 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 SLC36A1Q7Z2H8 476 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 COMMD1Q8N668 190 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 MSI2Q96DH6 328 aaKnown RBP12.88□□□□□ -0.35
CDH23-202ENST00000299366 PHYHIPLQ96FC7 376 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 NRIP2Q9BQI9 281 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 GPR132Q9UNW8 380 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 POMT1Q9Y6A1 747 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 TMEM127O75204 238 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 ACTL6AO96019 429 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 PGA4P0DJD7 388 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 PGA3P0DJD8 388 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 COX5AP20674 150 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 SULT1A1P50225 295 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 SOX8P57073 446 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
CDH23-202ENST00000299366 UQCC3Q6UW78 93 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 TIPARPQ7Z3E1 657 aaKnown RBP12.88□□□□□ -0.35
CDH23-202ENST00000299366 S1PR3Q99500 378 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 NPIPB9F8W1W9 429 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 PSG2P11465 335 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 PPP1CCP36873 323 aaKnown RBP12.88□□□□□ -0.35
CDH23-202ENST00000299366 CD200P41217 278 aa12.88□□□□□ -0.35
CDH23-202ENST00000299366 ZNF519Q8TB69 540 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms