RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 RPS23P62266 143 aaKnown RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 MZT1Q08AG7 82 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 BAMBIQ13145 260 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 SRSF7Q16629 238 aaKnown RBP eCLIP12.08□□□□□ -0.482e-7■■■■■ 30.9
C9orf3-202ENST00000297979 TMEM128Q5BJH2 165 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 POC1AQ8NBT0 407 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 MRPL37Q9BZE1 423 aaKnown RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 DUSP13Q9UII6 198 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 MGAT4AQ9UM21 535 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 DEGS1O15121 323 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 IGHV3-13P01766 116 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 ZNF44P15621 663 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 CD40P25942 277 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 GPX4P36969 197 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 H2BFSP57053 126 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 RBM39Q14498 530 aaKnown RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 Q6P435 159 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 Q6ZS49 121 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 MITD1Q8WV92 249 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 RDH5Q92781 318 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 DPCDQ9BVM2 203 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 WDR13Q9H1Z4 485 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 MEMO1Q9Y316 297 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 A6NLC8 198 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 G3V3Q6 166 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 HS3ST1O14792 307 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 SIX6O95475 246 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 PGAM2P15259 253 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 PI3P19957 117 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-202ENST00000297979 HTD2P86397 168 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 DHODHQ02127 395 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 DHRS11Q6UWP2 260 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 C11orf53Q8IXP5 236 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 OR11H4Q8NGC9 324 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 TMEM230Q96A57 120 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 PHB2Q99623 299 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 Q9N2K0 584 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 MAP1BP46821 2468 aaKnown RBP12.07□□□□□ -0.48
C9orf3-202ENST00000297979 NDUFB7P17568 137 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 ZNF146Q15072 292 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 SPIN3Q5JUX0 258 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 VHLLQ6RSH7 139 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 SSX8Q7RTT4 187 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 C9orf62Q8N4C0 152 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 ST6GALNAC3Q8NDV1 305 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 CASTOR1Q8WTX7 329 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 HES4Q9HCC6 221 aa12.07□□□□□ -0.48
C9orf3-202ENST00000297979 C14orf166Q9Y224 244 aaKnown RBP12.07□□□□□ -0.48
C9orf3-202ENST00000297979 RP1L1Q8IWN7 2480 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-202ENST00000297979 DUS4LO95620 317 aaKnown RBP12.06□□□□□ -0.48
C9orf3-202ENST00000297979 GLP1RP43220 463 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 GMFBP60983 142 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 DCAF12L2Q5VW00 463 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 LAMTOR1Q6IAA8 161 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TMEM108Q6UXF1 575 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 OR2Z1Q8NG97 314 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 OR10J5Q8NHC4 309 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 ASB13Q8WXK3 278 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 LURAP1Q96LR2 239 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TXN2Q99757 166 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TMEM246Q9BRR3 403 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 LIME1Q9H400 295 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 DECR2Q9NUI1 292 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 OPN4Q9UHM6 478 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 PCDHB10Q9UN67 800 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 HSPB11Q9Y547 144 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 OR2H2O95918 312 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TAS2R60P59551 318 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 ZNF826PQ6ZT77 177 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 WFDC8Q8IUA0 241 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 SYT3Q9BQG1 590 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 IGLV3-9A0A075B6K5 115 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 SLC34A2O95436 690 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 PPP3CBP16298 524 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 GLRA1P23415 457 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 CA7P43166 264 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 Q5BKY6 102 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 WDR82Q6UXN9 313 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 OR5M8Q8NGP6 311 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 MRPL30Q8TCC3 161 aaKnown RBP12.06□□□□□ -0.48
C9orf3-202ENST00000297979 WDR89Q96FK6 387 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TMPRSS13Q9BYE2 586 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 PRORYQ9H606 182 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 SLC23A1Q9UHI7 598 aa12.06□□□□□ -0.48
C9orf3-202ENST00000297979 TRBV6-6A0A0A6YYG2 114 aa12.05□□□□□ -0.48
C9orf3-202ENST00000297979 KIR2DS1A0A191URI9 304 aa12.05□□□□□ -0.48
C9orf3-202ENST00000297979 SIRPB1O00241 398 aa12.05□□□□□ -0.48
C9orf3-202ENST00000297979 SH2D1BO14796 132 aa12.05□□□□□ -0.48
C9orf3-202ENST00000297979 SFT2D2O95562 160 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms