RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 MRPL14Q6P1L8 145 aaKnown RBP13.47□□□□□ -0.25
UBAP1-201ENST00000297661 LYZL2Q7Z4W2 148 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 FAM89BQ8N5H3 189 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 PLEKHJ1Q9NW61 149 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 PADI1Q9ULC6 663 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.25
UBAP1-201ENST00000297661 CD59P13987 128 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 H3F3AP84243 136 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 OR52M1Q8NGK5 317 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 SRXN1Q9BYN0 137 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 ULBP2Q9BZM5 246 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 PROK2Q9HC23 129 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 DKKL1Q9UK85 242 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 CBY1Q9Y3M2 126 aa13.46□□□□□ -0.25
UBAP1-201ENST00000297661 A0A0G2JMM0 328 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 A0A0J9YW62 118 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 A0A1W2PPB8 328 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 A0A1W2PRS3 328 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 KIR3DP1A8MWS1 328 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 DHHO43323 396 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 TGOLN2O43493 480 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 ZIC3O60481 467 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 UMODP07911 640 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 ZNF25P17030 456 aaPredicted RBP13.46□□□□□ -0.26
UBAP1-201ENST00000297661 NTF4P34130 210 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 MTCP1P56278 107 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 DEFB124Q8NES8 71 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 TOMM40LQ969M1 308 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 LIME1Q9H400 295 aa13.46□□□□□ -0.26
UBAP1-201ENST00000297661 MARCH11A6NNE9 402 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
UBAP1-201ENST00000297661 PIGPP57054 158 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 IL13RA2Q14627 380 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 FBXW12Q6X9E4 464 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 OR8G5Q8NG78 346 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 OR5AC1P0C628 307 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 RAB4AP20338 218 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBAP1-201ENST00000297661 ZNF506Q5JVG8 444 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 TSPO2Q5TGU0 170 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 ZNF774Q6NX45 483 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 P4HA3Q7Z4N8 544 aa13.45□□□□□ -0.26
UBAP1-201ENST00000297661 YRDCQ86U90 279 aaKnown RBP13.45□□□□□ -0.26
UBAP1-201ENST00000297661 ALKBH3Q96Q83 286 aaPredicted RBP13.45□□□□□ -0.26
UBAP1-201ENST00000297661 URB1O60287 2271 aaKnown RBP13.45□□□□□ -0.26
UBAP1-201ENST00000297661 CLDN34H7C241 214 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 ECI1P42126 302 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 FAM189A2Q15884 450 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 TMEM123Q8N131 208 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 ZIC4Q8N9L1 334 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 HAS2Q92819 552 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 PRRC2CQ9Y520 2896 aaKnown RBP13.44□□□□□ -0.26
UBAP1-201ENST00000297661 IGKV1-27A0A075B6S5 117 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 IGHV1-45A0A0A0MS14 117 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 B4DEV8 164 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 DFFBO76075 338 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 LIFP15018 202 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 PCP4P48539 62 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 RND2P52198 227 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 FXYD4P59646 89 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 TMEM187Q14656 261 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 OR4X1Q8NH49 305 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 IFI44Q8TCB0 444 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 V9GYS6 101 aa13.44□□□□□ -0.26
UBAP1-201ENST00000297661 SHANK1Q9Y566 2161 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 SPAARA0A1B0GVQ0 90 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 IGLV3-1P01715 115 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 B4GALT1P15291 398 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 RPL23AP62750 156 aaKnown RBP13.43□□□□□ -0.26
UBAP1-201ENST00000297661 GPR137CQ8N3F9 429 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 OR14L1PQ8NHC6 308 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 TMEM54Q969K7 222 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 DUSP23Q9BVJ7 150 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 CDH20Q9HBT6 801 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 COX6A1P12074 109 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 DUSP1P28562 367 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 RPS18P62269 152 aaKnown RBP13.43□□□□□ -0.26
UBAP1-201ENST00000297661 ZNF266Q14584 549 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 PIGYQ3MUY2 71 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 ZNF880Q6PDB4 577 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 FBXL14Q8N1E6 418 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 OR1P1Q8NH06 330 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 CLDND2Q8NHS1 167 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
UBAP1-201ENST00000297661 FAM24AA6NFZ4 105 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 GCGP01275 180 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 C17orf78Q8N4C9 275 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 CABLES2Q9BTV7 478 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 NAA60Q9H7X0 242 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 NXT1Q9UKK6 140 aaKnown RBP13.42□□□□□ -0.26
UBAP1-201ENST00000297661 HSF4Q9ULV5 492 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 KLF7O75840 302 aaPredicted RBP13.42□□□□□ -0.26
UBAP1-201ENST00000297661 IGHV3-9P01782 118 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 LCATP04180 440 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 OMGP23515 440 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 C10orf128Q5T292 105 aa13.42□□□□□ -0.26
UBAP1-201ENST00000297661 RTN4IP1Q8WWV3 396 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms