RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 PRR33A8MZF0 331 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 HSD17B6O14756 317 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 CDS2O95674 445 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 SELEP16581 610 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 MDH2P40926 338 aaKnown RBP20.37■□□□□ 0.85
TRIM54-201ENST00000296098 PCSK4Q6UW60 755 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 ZNF695Q8IW36 515 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 SAT2Q96F10 170 aaPredicted RBP20.37■□□□□ 0.85
TRIM54-201ENST00000296098 USB1Q9BQ65 265 aaKnown RBP20.37■□□□□ 0.85
TRIM54-201ENST00000296098 MMP26Q9NRE1 261 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 POMT1Q9Y6A1 747 aa20.37■□□□□ 0.85
TRIM54-201ENST00000296098 ZNF891A8MT65 544 aaPredicted RBP20.36■□□□□ 0.85
TRIM54-201ENST00000296098 GPR137BO60478 399 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 CBR1P16152 277 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 ALKBH6Q3KRA9 238 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 C1orf162Q8NEQ5 155 aaPredicted RBP20.36■□□□□ 0.85
TRIM54-201ENST00000296098 ERGIC1Q969X5 290 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 CABLES2Q9BTV7 478 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 CCL28Q9NRJ3 127 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 P2RY1P47900 373 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 ERVK11-1P61568 191 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 MST1LQ2TV78 715 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 GPR157Q5UAW9 335 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 CMTM1Q8IZ96 169 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 SMIM8Q96KF7 97 aa20.36■□□□□ 0.85
TRIM54-201ENST00000296098 RCL1Q9Y2P8 373 aaKnown RBP20.36■□□□□ 0.85
TRIM54-201ENST00000296098 PSG7Q13046 419 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 ZNF154Q13106 437 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 ACSF3Q4G176 576 aaPredicted RBP20.35■□□□□ 0.85
TRIM54-201ENST00000296098 IL34Q6ZMJ4 242 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 MOB1BQ7L9L4 216 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 OR10J5Q8NHC4 309 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 KIRREL1Q96J84 757 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 SPIN2AQ99865 258 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 SPIN2BQ9BPZ2 258 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 ZDHHC8Q9ULC8 765 aa20.35■□□□□ 0.85
TRIM54-201ENST00000296098 NKX2-6A6NCS4 301 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 SIGLEC5O15389 551 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 CEACAM4O75871 244 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 PGA5P0DJD9 388 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 OR8G1Q15617 311 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 SELENOHQ8IZQ5 122 aaKnown RBP20.34■□□□□ 0.85
TRIM54-201ENST00000296098 UBAC2Q8NBM4 344 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 NRIP2Q9BQI9 281 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 TREM2Q9NZC2 230 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 DUXBA0A1W2PPF3 345 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 SIRPB1O00241 398 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 MED6O75586 246 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 OR2H2O95918 312 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 IGKV3-15P01624 115 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 SULT1A2P50226 295 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 PXDC1Q5TGL8 231 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 ZNF324BQ6AW86 544 aaPredicted RBP20.34■□□□□ 0.85
TRIM54-201ENST00000296098 H1FOOQ8IZA3 346 aaPredicted RBP20.34■□□□□ 0.85
TRIM54-201ENST00000296098 WDR31Q8NA23 367 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 LRRC46Q96FV0 321 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 BOD1Q96IK1 185 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 OR2W1Q9Y3N9 320 aa20.34■□□□□ 0.85
TRIM54-201ENST00000296098 ARID1AO14497 2285 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 TMEM210A6NLX4 147 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 SLC33A1O00400 549 aaPredicted RBP20.33■□□□□ 0.85
TRIM54-201ENST00000296098 FBXO24O75426 580 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 AGFG2O95081 481 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 NXPH2O95156 264 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 UCP1P25874 307 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 MPV17P39210 176 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 DEFA5Q01523 94 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 GNMTQ14749 295 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 DMBX1Q8NFW5 382 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 KLF14Q8TD94 323 aaPredicted RBP20.33■□□□□ 0.85
TRIM54-201ENST00000296098 GPHA2Q96T91 129 aa20.33■□□□□ 0.85
TRIM54-201ENST00000296098 H0Y980 276 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 CDIPTO14735 213 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 CLEC9AQ6UXN8 241 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 LILRB1Q8NHL6 650 aaPredicted RBP20.32■□□□□ 0.84
TRIM54-201ENST00000296098 BSCL2Q96G97 398 aaPredicted RBP20.32■□□□□ 0.84
TRIM54-201ENST00000296098 TMEM218A2RU14 115 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 S100GP29377 79 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 AKR1C2P52895 323 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 AKR1C1Q04828 323 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 PJVKQ0ZLH3 352 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 FOXF2Q12947 444 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 SHEQ5VZ18 495 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 ATRAIDQ6UW56 229 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 ZNF497Q6ZNH5 498 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 PLPPR1Q8TBJ4 325 aa20.32■□□□□ 0.84
TRIM54-201ENST00000296098 BORCS7-ASMTA0A0B4J1R7 106 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 NPIPB11E5RHQ5 1161 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 LPAR6P43657 344 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 ZADH2Q8N4Q0 377 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 OR5D13Q8NGL4 314 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 IL1F10Q8WWZ1 152 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 HRH4Q9H3N8 390 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 EP300Q09472 2414 aaPredicted RBP20.31■□□□□ 0.84
TRIM54-201ENST00000296098 AHRRA9YTQ3 701 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 H0YL77 283 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 ABCD4O14678 606 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 ADAM20O43506 726 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 TNFSF12O43508 249 aa20.31■□□□□ 0.84
TRIM54-201ENST00000296098 WDR1O75083 606 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms