RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 GPR12P47775 334 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 TNFAIP6P98066 277 aaPredicted RBP11.76□□□□□ -0.53
HPS3-201ENST00000296051 ZNF260Q3ZCT1 412 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 PP6455Q8WZ26 134 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 SLC26A1Q9H2B4 701 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 TRAV14DV4A0A0A6YYC5 116 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 ASAH2BP0C7U1 165 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 PMS2P11Q13670 270 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 RAB1CQ92928 201 aa11.76□□□□□ -0.53
HPS3-201ENST00000296051 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
HPS3-201ENST00000296051 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 ZNF154Q13106 437 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 PTPMT1Q8WUK0 201 aaPredicted RBP11.75□□□□□ -0.53
HPS3-201ENST00000296051 GPR61Q9BZJ8 451 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 TAAR3PQ9P1P4 343 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
HPS3-201ENST00000296051 CEACAM1P13688 526 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 RTP5Q14D33 572 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
HPS3-201ENST00000296051 DBX2Q6ZNG2 339 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 SLC35G3Q8N808 338 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
HPS3-201ENST00000296051 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 BGLAPP02818 100 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 GABRA4P48169 554 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 DYNLT3P51808 116 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 MOB3BQ86TA1 216 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 SCN10AQ9Y5Y9 1956 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 IGKV1D-42A0A075B6H8 117 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 TRAV39A0A0B4J263 110 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 CLEC18AA5D8T8 446 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 FGF7P21781 194 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 EFNB1P98172 346 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 FUT7Q11130 342 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 CLEC18CQ8NCF0 446 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 UCN2Q96RP3 112 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 ERRFI1Q9UJM3 462 aaPredicted RBP11.75□□□□□ -0.53
HPS3-201ENST00000296051 NPTNQ9Y639 398 aa11.75□□□□□ -0.53
HPS3-201ENST00000296051 LOC101059948A0A1B0GTJ6 334 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 RNF222A6NCQ9 220 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 TGOLN2O43493 480 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 DHRS3O75911 302 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 TRGC2P03986 189 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 COX6B1P14854 86 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 FUT3P21217 361 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 COX7A1P24310 79 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 PPP1CCP36873 323 aaKnown RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 P2RY4P51582 365 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ZNF90Q03938 601 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 PACRGQ96M98 296 aaPredicted RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 TMED3Q9Y3Q3 217 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 C3orf85A0A1B0GTC6 90 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 THBS4P35443 961 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ZNF441Q8N8Z8 693 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ADPRHL1Q8NDY3 354 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 SPSB2Q99619 263 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 LTBP1Q14766 1721 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 TRBV5-7A0A0A0MS05 114 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 NKX2-6A6NCS4 301 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 CHST1O43916 411 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 FAM87AP0C7U9 286 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 LIFP15018 202 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ATP6V0CP27449 155 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 MMP16P51512 607 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ENDOGQ14249 297 aaKnown RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 SPINK9Q5DT21 86 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 CYB561D1Q8N8Q1 229 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 IL22RA2Q969J5 263 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 RSPO3Q9BXY4 272 aaPredicted RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 GPR132Q9UNW8 380 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 H0YL77 283 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 MBP02144 154 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 GNG3P63215 75 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 DHODHQ02127 395 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 ZNF816Q0VGE8 651 aaPredicted RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 TOMM20LQ6UXN7 152 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 LHFPL2Q6ZUX7 228 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 PINX1Q96BK5 328 aaKnown RBP11.74□□□□□ -0.53
HPS3-201ENST00000296051 ADGRG7Q96K78 797 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 C5orf66Q9H5L9 145 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
HPS3-201ENST00000296051 CRYM-AS1A6NIL9 109 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 PRR33A8MZF0 331 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 H2BFWTQ7Z2G1 175 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 ASB10Q8WXI3 467 aa11.73□□□□□ -0.53
HPS3-201ENST00000296051 GUCD1Q96NT3 240 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms