RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CPNE2Q96FN4 548 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-201ENST00000291552 AURKAIP1Q9NWT8 199 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-201ENST00000291552 PSG11Q9UQ72 335 aa20.06■□□□□ 0.8
U2AF1-201ENST00000291552 HTR3BO95264 441 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 CLIC3O95833 236 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 SNRNP70P08621 437 aaKnown RBP20.05■□□□□ 0.8
U2AF1-201ENST00000291552 LTC4SQ16873 150 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 REC114Q7Z4M0 266 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 CENPVQ7Z7K6 275 aaPredicted RBP20.05■□□□□ 0.8
U2AF1-201ENST00000291552 OR56B4Q8NH76 319 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 RPEQ96AT9 228 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 NECAP2Q9NVZ3 263 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 SMPD3Q9NY59 655 aaPredicted RBP20.05■□□□□ 0.8
U2AF1-201ENST00000291552 IL36GQ9NZH8 169 aa20.05■□□□□ 0.8
U2AF1-201ENST00000291552 TCRBV4S1A1TA0A5B7 111 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 MAGEB3O15480 346 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 IGLL1P15814 213 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 DCKP27707 260 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 MNDAP41218 407 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 RBM11P57052 281 aaKnown RBP20.04■□□□□ 0.8
U2AF1-201ENST00000291552 NHLRC3Q5JS37 347 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 ZNF565Q8N9K5 539 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 SUMF2Q8NBJ7 301 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 DPCDQ9BVM2 203 aaPredicted RBP20.04■□□□□ 0.8
U2AF1-201ENST00000291552 BARHL1Q9BZE3 327 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 IFT22Q9H7X7 185 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 MOB4Q9Y3A3 225 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 AMMECR1Q9Y4X0 333 aaPredicted RBP20.04■□□□□ 0.8
U2AF1-201ENST00000291552 HSPE1-MOB4S4R3N1 261 aa20.04■□□□□ 0.8
U2AF1-201ENST00000291552 MAGEA13PA6NCF6 341 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 OGG1O15527 345 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 CD2P06729 351 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 C21orf33P30042 268 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-201ENST00000291552 KCNJ3P48549 501 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 GNG10P50151 68 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 DDI2Q5TDH0 399 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 DRAM1Q8N682 238 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-201ENST00000291552 CLEC2DQ9UHP7 191 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 ST3GAL6Q9Y274 331 aa20.03■□□□□ 0.8
U2AF1-201ENST00000291552 TSSC4Q9Y5U2 329 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-201ENST00000291552 PIN1P1O15428 100 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 C9orf152Q5JTZ5 239 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 FOXB2Q5VYV0 432 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 THNSL2Q86YJ6 484 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 ZNF555Q8NEP9 628 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 MRAPQ8TCY5 172 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 SGCDQ92629 289 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 SMIM19Q96E16 107 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 RDH12Q96NR8 316 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 TMEM138Q9NPI0 162 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 ING4Q9UNL4 249 aa20.02■□□□□ 0.8
U2AF1-201ENST00000291552 DIMT1Q9UNQ2 313 aaKnown RBP20.02■□□□□ 0.8
U2AF1-201ENST00000291552 TRBV5-5A0A0J9YX44 114 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 A0A1W2PP11 408 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 A0A1W2PPE3 182 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 M0QZK8 103 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 GEMIN2O14893 280 aaKnown RBP20.01■□□□□ 0.79
U2AF1-201ENST00000291552 BAG2O95816 211 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 PF4V1P10720 104 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 IGFBP3P17936 291 aaPredicted RBP20.01■□□□□ 0.79
U2AF1-201ENST00000291552 CD33P20138 364 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 BDKRB2P30411 391 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 ZNF93P35789 620 aaPredicted RBP20.01■□□□□ 0.79
U2AF1-201ENST00000291552 MADCAM1Q13477 382 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 TMPRSS11AQ6ZMR5 421 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 OSR2Q8N2R0 312 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 ZNF485Q8NCK3 441 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 METTL9Q9H1A3 318 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 PCDHB16Q9NRJ7 776 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 BABAM2Q9NXR7 383 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 ZNF281Q9Y2X9 895 aa20.01■□□□□ 0.79
U2AF1-201ENST00000291552 DNAH9Q9NYC9 4486 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 OR7C1O76099 320 aaPredicted RBP20■□□□□ 0.79
U2AF1-201ENST00000291552 FAM106CPP0CH98 169 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 SERPINA2P20848 420 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 RPS11P62280 158 aaKnown RBP eCLIP20■□□□□ 0.79
U2AF1-201ENST00000291552 PPP3R1P63098 170 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 DMKNQ6E0U4 476 aaPredicted RBP20■□□□□ 0.79
U2AF1-201ENST00000291552 FAM53AQ6NSI3 398 aaPredicted RBP20■□□□□ 0.79
U2AF1-201ENST00000291552 OR10A7Q8NGE5 316 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 OR4X2Q8NGF9 303 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 OR52N1Q8NH53 320 aa20■□□□□ 0.79
U2AF1-201ENST00000291552 TRAV8-7A0A075B6U6 113 aa19.99■□□□□ 0.79
U2AF1-201ENST00000291552 C15orf65H3BRN8 121 aa19.99■□□□□ 0.79
U2AF1-201ENST00000291552 C5orf56Q8N8D9 126 aa19.99■□□□□ 0.79
U2AF1-201ENST00000291552 ZFP41Q8N8Y5 198 aa19.99■□□□□ 0.79
U2AF1-201ENST00000291552 UBALD1Q8TB05 177 aa19.99■□□□□ 0.79
U2AF1-201ENST00000291552 PGLYRP3Q96LB9 341 aa19.99■□□□□ 0.79
U2AF1-201ENST00000291552 ZNF184Q99676 751 aaPredicted RBP19.99■□□□□ 0.79
U2AF1-201ENST00000291552 EXOSC1Q9Y3B2 195 aaKnown RBP19.99■□□□□ 0.79
U2AF1-201ENST00000291552 RIPK1Q13546 671 aa19.98■□□□□ 0.79
U2AF1-201ENST00000291552 DOC2BQ14184 412 aa19.98■□□□□ 0.79
U2AF1-201ENST00000291552 ETV3LQ6ZN32 361 aa19.98■□□□□ 0.79
U2AF1-201ENST00000291552 OR8H3Q8N146 312 aa19.98■□□□□ 0.79
U2AF1-201ENST00000291552 GHSRQ92847 366 aa19.98■□□□□ 0.79
U2AF1-201ENST00000291552 COL7A1Q02388 2944 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 TMEM30CPA0ZSE6 113 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 HSD17B6O14756 317 aa19.97■□□□□ 0.79
U2AF1-201ENST00000291552 GPX5O75715 221 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms