RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 NCOR1P1Q9H4R4 102 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.62
TPM1-202ENST00000288398 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
TPM1-202ENST00000288398 ERVK13-1Q9NX77 482 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
TPM1-202ENST00000288398 GABRPO00591 440 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 OR7C1O76099 320 aaPredicted RBP11.16□□□□□ -0.62
TPM1-202ENST00000288398 IL3RAP26951 378 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 DCTN2Q13561 401 aaKnown RBP11.16□□□□□ -0.62
TPM1-202ENST00000288398 HNF4GQ14541 408 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 UNQ9370/PRO34162Q6UXP9 181 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 ZNF329Q86UD4 541 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 OR10K1Q8NGX5 313 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 RFESDQ8TAC1 157 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 METTL9Q9H1A3 318 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 AMBNQ9NP70 447 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 AASSQ9UDR5 926 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 ING4Q9UNL4 249 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 PSG11Q9UQ72 335 aa11.16□□□□□ -0.62
TPM1-202ENST00000288398 TRAV24A0A0B4J272 114 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
TPM1-202ENST00000288398 HSD17B6O14756 317 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 FGF16O43320 207 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 IGKV1D-33P01593 117 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 IGKV1-33P01594 117 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 GAPDHP04406 335 aaKnown RBP11.15□□□□□ -0.62
TPM1-202ENST00000288398 AMY1AP04745 511 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 AMY2AP04746 511 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 SLC6A1P30531 599 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 PIGYQ3MUY2 71 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 VAX1Q5SQQ9 334 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 TMPRSS11AQ6ZMR5 421 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 SLC35E3Q7Z769 313 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 STX19Q8N4C7 294 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 COMMD1Q8N668 190 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 DPCDQ9BVM2 203 aaPredicted RBP11.15□□□□□ -0.62
TPM1-202ENST00000288398 JAM3Q9BX67 310 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 RAB9BQ9NP90 201 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 ZFP57Q9NU63 452 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 TAS2R4Q9NYW5 299 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 ST3GAL6Q9Y274 331 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 KIAA2026Q5HYC2 2103 aa11.15□□□□□ -0.62
TPM1-202ENST00000288398 E9PI62 339 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 K7EIL1 84 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 CCRL2O00421 344 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 GZMHP20718 246 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
TPM1-202ENST00000288398 SSTR5P35346 364 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 RPL23AP62750 156 aaKnown RBP11.14□□□□□ -0.63
TPM1-202ENST00000288398 CD69Q07108 199 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 MED21Q13503 144 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 ATAD3CQ5T2N8 411 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 DDI2Q5TDH0 399 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 RSBN1Q5VWQ0 802 aaPredicted RBP11.14□□□□□ -0.63
TPM1-202ENST00000288398 RPL22L1Q6P5R6 122 aaKnown RBP11.14□□□□□ -0.63
TPM1-202ENST00000288398 LINC00596Q86U02 117 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 C5orf56Q8N8D9 126 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 SUMF2Q8NBJ7 301 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 KLHL30-AS1Q8NEE0 82 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 ZNF555Q8NEP9 628 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 OR52I1Q8NGK6 324 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 GON7Q9BXV9 100 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 CKLFQ9UBR5 152 aa11.14□□□□□ -0.63
TPM1-202ENST00000288398 LOC100130705A0A1B0GUX0 176 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 A0A1W2PPI3 338 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 IRGMA1A4Y4 181 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A18PA6NE21 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A16PA6NEW6 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A20PA6NIJ5 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A9PA6NNJ1 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A12PA8MX19 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A5PA8MXJ8 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 SDCBPO00560 298 aaPredicted RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 ZNF780AO75290 641 aaPredicted RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 CDRT1O95170 752 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A15PP0C7V4 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A13PP0C7W8 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A14PP0C7W9 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 FAM90A24PP0C7X0 464 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 CGB3P0DN86 165 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 CGB7P0DN87 165 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 MYL12AP19105 171 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 SERPINA2P20848 420 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 RBM11P57052 281 aaKnown RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 RAB25P57735 213 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 PAX5Q02548 391 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 CCDC58Q4VC31 144 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 OR2W3Q7Z3T1 314 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 MRPL41Q8IXM3 137 aaKnown RBP11.13□□□□□ -0.63
TPM1-202ENST00000288398 OR51A2Q8NGJ7 313 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 OR52N1Q8NH53 320 aa11.13□□□□□ -0.63
TPM1-202ENST00000288398 PLPPR1Q8TBJ4 325 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms